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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d017390_P001
Zm00001d025939_P003
Zm00001d036342_P001
Zm00001d049553_P001
Zm00001d051288_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77610.1 Zm00001d017390_P001 AT3G60600.1 21798944
AT1G77610.1 Zm00001d025939_P003 AT3G60600.1 21798944
AT1G77610.1 Zm00001d036342_P001 AT3G60600.1 21798944
AT1G77610.1 Zm00001d049553_P001 AT3G60600.1 21798944
AT1G77610.1 Zm00001d051288_P001 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES13196 Sorghum plasma membrane 89.79 87.17
TraesCS7B01G225300.2 Wheat plasma membrane 85.29 84.27
TraesCS7A01G324800.1 Wheat plasma membrane 85.29 84.27
TraesCS7D01G321200.1 Wheat plasma membrane 84.98 83.98
Os08t0104900-01 Rice plasma membrane 84.68 83.68
HORVU7Hr1G077640.13 Barley endoplasmic reticulum, mitochondrion, plasma membrane 84.68 78.55
Bra003677.1-P Field mustard plasma membrane 78.98 78.27
CDX79213 Canola plasma membrane 78.98 78.27
VIT_18s0001g02970.t01 Wine grape plasma membrane 79.58 77.94
CDX68051 Canola plasma membrane 78.38 77.68
Bra015662.1-P Field mustard plasma membrane 78.38 77.45
CDX87511 Canola plasma membrane 78.38 77.45
AT1G77610.1 Thale cress plasma membrane 78.08 77.38
Zm00001d002941_P001 Maize plasma membrane 79.88 77.33
CDX88379 Canola plasma membrane 78.08 77.15
GSMUA_Achr3P22140_001 Banana plasma membrane 78.98 77.13
GSMUA_Achr6P18770_001 Banana plasma membrane 78.38 76.54
CDY38825 Canola plasma membrane 77.78 75.73
CDX96572 Canola plasma membrane 77.78 75.73
Bra016403.1-P Field mustard plasma membrane 77.78 75.51
KRH16322 Soybean plasma membrane 77.48 75.44
KRH18757 Soybean plasma membrane 77.48 75.44
KRH53233 Soybean plasma membrane 78.08 75.36
AT1G21870.1 Thale cress plasma membrane 76.88 75.07
KRH64681 Soybean plasma membrane 77.48 74.78
Solyc11g012880.1.1 Tomato plasma membrane 75.38 74.48
PGSC0003DMT400045308 Potato plasma membrane 75.38 73.82
Solyc06g060370.2.1 Tomato plasma membrane 75.38 73.82
CDY70208 Canola peroxisome, plasma membrane, plastid 31.53 61.4
CDY25067 Canola peroxisome, plasma membrane, plastid 31.53 61.4
CDY38193 Canola peroxisome, plasma membrane, plastid 31.53 61.4
CDY63382 Canola peroxisome, plasma membrane, plastid 31.53 61.4
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 23.42 40.84
Zm00001d047754_P001 Maize plastid 31.53 32.41
Zm00001d028713_P001 Maize plasma membrane 31.53 32.41
CDX79220 Canola mitochondrion 43.84 30.1
Zm00001d010985_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane, plastid 28.53 28.02
Zm00001d021005_P001 Maize extracellular 6.01 23.81
Zm00001d043178_P001 Maize plasma membrane 23.42 21.97
Zm00001d033648_P002 Maize plasma membrane 24.92 21.96
Zm00001d012562_P001 Maize golgi, plasma membrane, vacuole 23.42 21.67
Zm00001d010654_P001 Maize plasma membrane 22.82 21.29
Zm00001d038562_P001 Maize plasma membrane 22.52 21.01
Zm00001d023261_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 22.22 19.32
Zm00001d024708_P001 Maize plasma membrane 20.42 19.21
Zm00001d036222_P002 Maize peroxisome 19.22 14.65
Zm00001d045316_P002 Maize peroxisome 18.92 14.62
Zm00001d012747_P007 Maize cytosol, peroxisome, plasma membrane 18.02 11.03
Zm00001d043473_P004 Maize cytosol, peroxisome, plasma membrane 18.02 10.73
Zm00001d011388_P001 Maize cytosol 7.81 9.56
Protein Annotations
EMBL:BT038152EMBL:BT039354EMBL:EU964761EnsemblPlants:Zm00001d035007_P001EnsemblPlants:Zm00001d035007_T001EnsemblPlantsGene:Zm00001d035007
EntrezGene:100283441GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Sugar_P_trans_domPANTHER:PTHR44674
PFAM:PF03151ProteinID:AQK78083.1SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI00017B6BA6UniProt:B4FM14
MapMan:24.2.1.1.2:::::
Description
GDP-mannose transporter GONST5
Coordinates
chr6:-:1587121..1589211
Molecular Weight (calculated)
36655.5 Da
IEP (calculated)
9.701
GRAVY (calculated)
0.686
Length
333 amino acids
Sequence
(BLAST)
001: MEDAKMGNGA TIRAVLAILQ WWGFNVTVII INKWIFQKLE FKFPLTVSCV HFICSSIGAY IAIKVLRTKP LIEVASEDRW RRIFPMSLVF CVNIVLGNVS
101: LRYIPVSFMQ TIKSFTPATT VVLQWLVWRK YFEWRIWASL VPIVGGILVT SVTELSFNTA GFCAALVGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPL
201: ATLILSVPAV ALEGGAVLGW LRTHESVGPA LAVVVTSGVL AFCLNFSIFY VIHSTTAVTF NVAGNLKVAV AVLASWMVFR NPISAMNALG CGVTLVGCTF
301: YGYVRHRLSQ NQAPRARLEM LPLTAVDKQG DKI
Best Arabidopsis Sequence Match ( AT1G77610.1 )
(BLAST)
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.