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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY63022 Canola plasma membrane 91.6 64.52
CDY48700 Canola plasma membrane 91.22 64.25
CDX92132 Canola plasma membrane 75.19 63.55
AT3G17430.2 Thale cress plasma membrane 89.31 62.4
KRH02464 Soybean endoplasmic reticulum, plasma membrane 80.92 59.89
CDY43289 Canola plasma membrane 81.68 58.79
CDX93651 Canola plasma membrane 82.44 58.54
PGSC0003DMT400064764 Potato plasma membrane 58.78 57.89
CDX77330 Canola plasma membrane 81.3 57.72
CDY41853 Canola plasma membrane 80.92 57.45
KRH12712 Soybean endoplasmic reticulum 83.97 57.29
KRH37626 Soybean mitochondrion, plasma membrane 83.21 56.77
Solyc02g088900.2.1 Tomato plasma membrane 82.06 56.43
KRH19508 Soybean plasma membrane 81.68 56.17
VIT_05s0020g00740.t01 Wine grape plasma membrane 82.06 56.14
Solyc02g066910.2.1 Tomato plasma membrane 80.53 55.97
GSMUA_Achr5P22150_001 Banana plasma membrane 79.77 55.88
GSMUA_Achr6P04900_001 Banana plasma membrane 79.01 55.5
HORVU5Hr1G019670.3 Barley plasma membrane 61.07 54.61
VIT_07s0005g02280.t01 Wine grape plasma membrane 79.01 54.47
EER93603 Sorghum plasma membrane 76.72 53.17
Zm00001d033648_P002 Maize plasma membrane 76.72 53.17
Os03t0702700-02 Rice plasma membrane 50.76 52.78
CDY41850 Canola plasma membrane 56.11 52.69
TraesCS4B01G040800.1 Wheat plasma membrane 75.95 51.96
TraesCS4A01G273200.1 Wheat plasma membrane 75.57 51.56
TraesCS4D01G038200.1 Wheat plasma membrane 75.57 51.56
KRG96589 Soybean endoplasmic reticulum, plasma membrane, vacuole 74.43 50.65
KRH68321 Soybean plasma membrane 74.43 42.86
Bra022215.1-P Field mustard cytosol, extracellular, plasma membrane 58.02 38.38
PGSC0003DMT400003706 Potato plasma membrane 80.53 36.95
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 41.22 31.21
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 41.6 31.14
CDX98450 Canola plasma membrane 40.08 31.07
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 41.22 30.95
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 41.22 30.95
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 40.84 30.92
CDX88177 Canola endoplasmic reticulum, plasma membrane, vacuole 40.84 30.92
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 41.22 30.86
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 41.22 30.77
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 41.22 30.77
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 40.08 30.43
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 40.46 30.29
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 40.46 30.29
CDX97572 Canola plasma membrane 40.08 30.26
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 39.69 30.14
CDY33222 Canola golgi, peroxisome, plasma membrane 38.93 28.33
CDY39113 Canola plasma membrane 38.93 28.33
CDY36312 Canola endoplasmic reticulum, extracellular 12.21 27.12
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 12.21 21.62
CDY00919 Canola extracellular 6.49 20.73
CDY71741 Canola endoplasmic reticulum, plasma membrane 21.76 19.86
CDX73882 Canola endoplasmic reticulum, plasma membrane 22.9 19.61
CDY00731 Canola endoplasmic reticulum, plasma membrane 22.9 19.61
CDY01011 Canola plasma membrane 22.9 19.48
CDY08536 Canola endoplasmic reticulum, plasma membrane 22.9 19.35
CDX70255 Canola endoplasmic reticulum, plasma membrane 22.9 19.29
CDX70125 Canola endoplasmic reticulum, plasma membrane 22.52 19.28
CDX80975 Canola endoplasmic reticulum, plasma membrane 22.52 19.28
CDX98868 Canola endoplasmic reticulum, plasma membrane 22.52 19.28
CDY11341 Canola plasma membrane 22.52 19.28
CDY41396 Canola endoplasmic reticulum, plasma membrane 22.52 18.97
CDY00918 Canola endoplasmic reticulum, extracellular, plasma membrane 8.4 18.49
CDX76352 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDX88102 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY06070 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY16783 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY19068 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY30718 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY32060 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY38198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY40726 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY41333 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY43207 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY56711 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY63119 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY64269 Canola endoplasmic reticulum, mitochondrion, plasma membrane 22.52 18.21
CDY25067 Canola peroxisome, plasma membrane, plastid 11.83 18.13
CDY38193 Canola peroxisome, plasma membrane, plastid 11.83 18.13
CDY63382 Canola peroxisome, plasma membrane, plastid 11.83 18.13
CDY70208 Canola peroxisome, plasma membrane, plastid 11.83 18.13
CDX79213 Canola plasma membrane 21.76 16.96
CDX68051 Canola plasma membrane 21.37 16.67
CDX96572 Canola plasma membrane 21.76 16.67
CDY38825 Canola plasma membrane 21.76 16.67
CDX87511 Canola plasma membrane 21.37 16.62
CDX88379 Canola plasma membrane 21.37 16.62
CDX80906 Canola endoplasmic reticulum, plasma membrane 17.18 16.13
CDY30085 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 20.99 15.24
CDX98058 Canola plastid 20.61 14.96
CDY06643 Canola golgi, peroxisome, plasma membrane 21.37 14.85
CDY53550 Canola mitochondrion, plastid 22.52 14.82
CDY42695 Canola endoplasmic reticulum, plasma membrane 22.52 14.75
CDY21054 Canola plastid 20.23 14.68
CDY58615 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 20.23 14.68
CDX86520 Canola golgi, peroxisome, plasma membrane 21.76 13.73
CDY15580 Canola plasma membrane 21.76 13.73
CDY10201 Canola golgi, peroxisome, plasma membrane 21.37 13.49
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 8.4 11.52
CDX79220 Canola mitochondrion 14.12 7.63
CDY41331 Canola cytosol, peroxisome, plasma membrane 0.0 0.0
Protein Annotations
EnsemblPlants:CDY66383EnsemblPlantsGene:GSBRNA2T00053509001GO:A0A078JFM2GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR11132PANTHER:PTHR11132:SF170ProteinID:CDY66383ProteinID:CDY66383.1TMHMM:TMhelixUniParc:UPI0004EDB3B2
UniProt:A0A078JFM2MapMan:24.2.1.1.10::::
Description
BnaCnng50630DBnaCnng50630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFM2]
Coordinates
chrLK035235:+:4275..6167
Molecular Weight (calculated)
28732.9 Da
IEP (calculated)
9.337
GRAVY (calculated)
0.684
Length
262 amino acids
Sequence
(BLAST)
001: MIHMGFSGFV AFLLIRVFKV VAPVKMTFQI YATCVVPISA FFASSLWFGI TAYLHISVAF IQMLKALIAT FIMAVIRGTD KPRCDVFSNM LLVSVGVVIS
101: SYGEIHFNVV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPINSLYYIA PCSFPLVCVG ETHDGMIGRT GAVTIRVAGV LKDWILIALS TVIFPESTIT
201: GLNIIGYAIA LCGVVMYNYI KVRDVKASQL TADSLPDRIN KEWKMEKKSS DKFNPDLGNQ AA
Best Arabidopsis Sequence Match ( AT1G48230.1 )
(BLAST)
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFSGFVAF LLIRVFKVVS PVKMTFEIYV TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FLMAVVCGTD KARCDVFMNM VLVSVGVVVS SYGEINFNVI GTVYQVMGIF AEALRLVLTQ VLLQKKGLTL NPVTSLYYIA
201: PCSFVFLSLP WYVLEKPNID VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKIKDVKAI QPTTDSLPDR ITKDWKEKNS SDGGSPRGLE LNDEEAPLIT SRLSHIGRTQ LGNHTAV
Arabidopsis Description
UDP-Apiose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJV9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.