Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027340.1-P | Field mustard | plasma membrane | 99.11 | 96.54 |
| CDX97572 | Canola | plasma membrane | 99.11 | 96.54 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 95.56 | 95.0 |
| CDY39113 | Canola | plasma membrane | 94.67 | 88.89 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 93.79 | 88.06 |
| Solyc10g007610.2.1 | Tomato | plasma membrane | 83.43 | 83.68 |
| PGSC0003DMT400054846 | Potato | plasma membrane | 83.43 | 83.68 |
| KRH13610 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 81.36 | 82.58 |
| KRH43853 | Soybean | plasma membrane | 81.07 | 82.28 |
| VIT_15s0046g00460.t01 | Wine grape | cytosol, plasma membrane, vacuole | 81.95 | 82.2 |
| Solyc07g056530.2.1 | Tomato | plasma membrane, vacuole | 81.66 | 81.9 |
| PGSC0003DMT400071049 | Potato | plasma membrane, vacuole | 49.41 | 79.52 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 66.27 | 71.57 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 73.08 | 71.18 |
| Zm00001d024708_P001 | Maize | plasma membrane | 69.23 | 66.1 |
| Os08t0135100-01 | Rice | peroxisome, plasma membrane, vacuole | 68.05 | 65.71 |
| EES14504 | Sorghum | golgi, peroxisome, plasma membrane | 69.23 | 64.46 |
| TraesCS7A01G309100.1 | Wheat | plasma membrane | 67.46 | 63.33 |
| TraesCS7D01G305800.1 | Wheat | plasma membrane | 67.46 | 63.16 |
| TraesCS7B01G209100.1 | Wheat | plasma membrane | 67.16 | 63.06 |
| HORVU7Hr1G073550.1 | Barley | plastid | 67.46 | 56.3 |
| CDY43289 | Canola | plasma membrane | 47.63 | 44.23 |
| CDY35355 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.38 | 43.48 |
| CDX93651 | Canola | plasma membrane | 47.34 | 43.36 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.08 | 43.06 |
| CDX76757 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.38 | 42.98 |
| CDY11527 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.38 | 42.98 |
| CDY48700 | Canola | plasma membrane | 47.04 | 42.74 |
| CDY63022 | Canola | plasma membrane | 47.04 | 42.74 |
| CDX76991 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.49 | 42.61 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.2 | 42.2 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.2 | 42.2 |
| CDX68840 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.79 | 42.17 |
| CDX75240 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.79 | 42.17 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.49 | 42.0 |
| CDX77330 | Canola | plasma membrane | 45.56 | 41.73 |
| CDY41853 | Canola | plasma membrane | 45.56 | 41.73 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.2 | 41.71 |
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.2 | 41.71 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 42.9 | 41.43 |
| CDY66383 | Canola | plasma membrane | 31.07 | 40.08 |
| CDY00918 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 12.72 | 36.13 |
| CDX92132 | Canola | plasma membrane | 32.25 | 35.16 |
| CDY36312 | Canola | endoplasmic reticulum, extracellular | 10.65 | 30.51 |
| CDY41850 | Canola | plasma membrane | 24.85 | 30.11 |
| CDY36328 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.02 | 29.73 |
| CDY71741 | Canola | endoplasmic reticulum, plasma membrane | 23.67 | 27.87 |
| CDY11341 | Canola | plasma membrane | 24.56 | 27.12 |
| CDX80975 | Canola | endoplasmic reticulum, plasma membrane | 24.56 | 27.12 |
| CDX98868 | Canola | endoplasmic reticulum, plasma membrane | 24.26 | 26.8 |
| CDX70125 | Canola | endoplasmic reticulum, plasma membrane | 24.26 | 26.8 |
| CDX70255 | Canola | endoplasmic reticulum, plasma membrane | 24.56 | 26.69 |
| CDY41396 | Canola | endoplasmic reticulum, plasma membrane | 24.56 | 26.69 |
| CDY01011 | Canola | plasma membrane | 24.26 | 26.62 |
| CDX76352 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY56711 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY43207 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDX88102 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY41333 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY06070 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY40726 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY63119 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY38198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY64269 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY16783 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY32060 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY30718 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDY19068 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 25.44 | 26.54 |
| CDX73882 | Canola | endoplasmic reticulum, plasma membrane | 23.96 | 26.47 |
| CDX68051 | Canola | plasma membrane | 26.04 | 26.19 |
| CDX80906 | Canola | endoplasmic reticulum, plasma membrane | 21.6 | 26.16 |
| CDY00731 | Canola | endoplasmic reticulum, plasma membrane | 23.67 | 26.14 |
| CDY08536 | Canola | endoplasmic reticulum, plasma membrane | 23.96 | 26.13 |
| CDX79213 | Canola | plasma membrane | 25.74 | 25.89 |
| CDX88379 | Canola | plasma membrane | 25.44 | 25.52 |
| CDX87511 | Canola | plasma membrane | 25.44 | 25.52 |
| CDX96572 | Canola | plasma membrane | 25.44 | 25.15 |
| CDY38825 | Canola | plasma membrane | 25.44 | 25.15 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 12.43 | 24.56 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 12.43 | 24.56 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 12.43 | 24.56 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 12.43 | 24.56 |
| CDY06643 | Canola | golgi, peroxisome, plasma membrane | 25.74 | 23.08 |
| CDY00919 | Canola | extracellular | 5.33 | 21.95 |
| CDY53550 | Canola | mitochondrion, plastid | 25.44 | 21.61 |
| CDY21054 | Canola | plastid | 23.08 | 21.61 |
| CDY42695 | Canola | endoplasmic reticulum, plasma membrane | 25.44 | 21.5 |
| CDY10201 | Canola | golgi, peroxisome, plasma membrane | 26.33 | 21.45 |
| CDY30085 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 22.78 | 21.33 |
| CDY58615 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 22.78 | 21.33 |
| CDX98058 | Canola | plastid | 22.78 | 21.33 |
| CDY15580 | Canola | plasma membrane | 26.04 | 21.2 |
| CDX86520 | Canola | golgi, peroxisome, plasma membrane | 26.04 | 21.2 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.17 | 16.23 |
| CDX79220 | Canola | mitochondrion | 15.09 | 10.52 |
| CDY41331 | Canola | cytosol, peroxisome, plasma membrane | 0.3 | 0.41 |
Protein Annotations
| EnsemblPlants:CDX98450 | EnsemblPlantsGene:GSBRNA2T00106062001 | GO:A0A078E8N2 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF235 |
| PFAM:PF03151 | ProteinID:CDX98450 | ProteinID:CDX98450.1 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI0004EF0AD9 | MapMan:24.2.1.1.10 | : | : | : | : |
Description
BnaC05g39250D
Coordinates
chrLK031905:-:173492..175467
Molecular Weight (calculated)
37341.9 Da
IEP (calculated)
8.653
GRAVY (calculated)
0.804
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRSRGFMR DEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMEILVKRK GIKLNPISLM
201: YYVSPCSAVC LFVPWIFLEK SKMDGNGPWD FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTVIN LFGYAIAIAG
301: VAAYNNHKLK KEASRVTSET PGDGESIPLV SLPNTERG
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMEILVKRK GIKLNPISLM
201: YYVSPCSAVC LFVPWIFLEK SKMDGNGPWD FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTVIN LFGYAIAIAG
301: VAAYNNHKLK KEASRVTSET PGDGESIPLV SLPNTERG
001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.