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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY43207 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY63119 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY64269 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDX88102 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY41333 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY40726 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDX76352 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY32060 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY30718 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY19068 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY06070 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY16783 Canola endoplasmic reticulum, mitochondrion, plasma membrane 100.0 100.0
CDY00918 Canola endoplasmic reticulum, extracellular, plasma membrane 35.19 95.8
CDY41396 Canola endoplasmic reticulum, plasma membrane 89.51 93.25
CDX70255 Canola endoplasmic reticulum, plasma membrane 89.2 92.93
CDY71741 Canola endoplasmic reticulum, plasma membrane 79.01 89.2
CDY00919 Canola extracellular 22.22 87.8
AT3G10290.1 Thale cress plastid 94.75 86.48
CDX80906 Canola endoplasmic reticulum, plasma membrane 72.22 83.87
VIT_08s0007g08970.t01 Wine grape plastid 79.94 81.7
CDY53550 Canola mitochondrion, plastid 100.0 81.41
CDY42695 Canola endoplasmic reticulum, plasma membrane 100.0 81.0
PGSC0003DMT400021093 Potato endoplasmic reticulum, plasma membrane 76.23 79.68
Solyc10g079280.1.1 Tomato endoplasmic reticulum, plasma membrane 75.93 79.35
PGSC0003DMT400033107 Potato endoplasmic reticulum, plasma membrane 64.2 79.09
Solyc04g016280.2.1 Tomato endoplasmic reticulum, plasma membrane 75.62 79.03
Solyc10g079910.1.1 Tomato endoplasmic reticulum, plasma membrane 73.46 76.77
PGSC0003DMT400076739 Potato plasma membrane 72.84 76.13
KRH66884 Soybean peroxisome 78.4 72.99
KRG95205 Soybean peroxisome 78.09 72.29
CDY36312 Canola endoplasmic reticulum, extracellular 25.93 71.19
CDY01011 Canola plasma membrane 66.36 69.81
CDY08536 Canola endoplasmic reticulum, plasma membrane 66.36 69.35
CDY00731 Canola endoplasmic reticulum, plasma membrane 65.43 69.28
CDX98868 Canola endoplasmic reticulum, plasma membrane 65.43 69.28
CDX73882 Canola endoplasmic reticulum, plasma membrane 65.12 68.95
CDY11341 Canola plasma membrane 65.12 68.95
CDX70125 Canola endoplasmic reticulum, plasma membrane 65.12 68.95
CDX80975 Canola endoplasmic reticulum, plasma membrane 65.12 68.95
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 30.56 66.89
Bra034102.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 98.46 56.06
CDY30085 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 53.7 48.2
CDX98058 Canola plastid 53.4 47.92
CDY21054 Canola plastid 53.4 47.92
CDY58615 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 53.09 47.65
CDX68051 Canola plasma membrane 32.41 31.25
CDX79213 Canola plasma membrane 32.41 31.25
CDX88379 Canola plasma membrane 31.79 30.56
CDX87511 Canola plasma membrane 31.48 30.27
CDX96572 Canola plasma membrane 30.56 28.95
CDY38825 Canola plasma membrane 30.25 28.66
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 29.63 27.43
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 29.32 27.14
CDY38193 Canola peroxisome, plasma membrane, plastid 14.2 26.9
CDY63382 Canola peroxisome, plasma membrane, plastid 14.2 26.9
CDY25067 Canola peroxisome, plasma membrane, plastid 14.2 26.9
CDY70208 Canola peroxisome, plasma membrane, plastid 14.2 26.9
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 28.7 26.88
CDX88177 Canola endoplasmic reticulum, plasma membrane, vacuole 28.7 26.88
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 28.7 26.88
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 29.01 26.86
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 28.7 26.57
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 28.4 26.36
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 28.4 26.36
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 27.78 26.09
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 28.09 25.93
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 27.47 25.8
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 27.78 25.64
CDX98450 Canola plasma membrane 26.54 25.44
CDX97572 Canola plasma membrane 26.54 24.78
CDY39113 Canola plasma membrane 27.16 24.44
CDY33222 Canola golgi, peroxisome, plasma membrane 26.54 23.89
CDY43289 Canola plasma membrane 26.54 23.63
CDY63022 Canola plasma membrane 26.54 23.12
CDY48700 Canola plasma membrane 26.54 23.12
CDX93651 Canola plasma membrane 26.23 23.04
CDX77330 Canola plasma membrane 26.23 23.04
CDY41853 Canola plasma membrane 25.93 22.76
CDY66383 Canola plasma membrane 18.21 22.52
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 12.04 20.42
CDX92132 Canola plasma membrane 19.44 20.32
CDY06643 Canola golgi, peroxisome, plasma membrane 21.91 18.83
CDY41850 Canola plasma membrane 16.05 18.64
CDY10201 Canola golgi, peroxisome, plasma membrane 22.53 17.59
CDY15580 Canola plasma membrane 21.91 17.11
CDX86520 Canola golgi, peroxisome, plasma membrane 21.91 17.11
CDX79220 Canola mitochondrion 18.83 12.58
CDY41331 Canola cytosol, peroxisome, plasma membrane 0.62 0.81
Protein Annotations
MapMan:35.1GO:A0A078CHV6UniProt:A0A078CHV6ProteinID:CDY16783.1ProteinID:CDY19068.1ProteinID:CDY30718.1
ProteinID:CDY32060.1ProteinID:CDY38198.1ProteinID:CDY40726.1ProteinID:CDY41333.1ProteinID:CDY43207.1EnsemblPlants:CDY56711
ProteinID:CDY56711ProteinID:CDY56711.1ProteinID:CDY63119.1ProteinID:CDY64269.1GO:GO:0005575GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00019946001PFAM:PF03151PANTHER:PTHR44010PANTHER:PTHR44010:SF2SUPFAM:SSF103481
InterPro:Sugar_P_trans_domTMHMM:TMhelixUniParc:UPI0004EEB6CBSEG:seg::
Description
BnaC01g38690DBnaA01g31860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078CHV6]
Coordinates
chrLK033513:+:34319..35905
Molecular Weight (calculated)
35505.5 Da
IEP (calculated)
10.333
GRAVY (calculated)
0.657
Length
324 amino acids
Sequence
(BLAST)
001: MNNKKNPDQK PEMPPSSSSP KKQTLFISSL ILLWYTSNIG VLLLNKFLLS NYGFKFPIFL TMCHMSACAI LSYVSIVFLK LVPLQHLKSR SQFMKVATLS
101: IVFCASVVGG NVSLRYLPVS FNQAVGATTP FFTALFAYLM TFKREAWVTY GALVPVVTGV VIASGGEPGF HWFGFIMCIS ATAARAFKSV LQGILLSSEG
201: EKLNSMNLML YMSPIAVIAL LPVTIVMEPD VMSVTLSLAR QHQYMWILLL VNSVMAYSAN LLNFLVTKHT SALTLQVLGN AKGAVAVVIS ILLFRNPVTV
301: MGIGGYSITV LGVVAYGETK RRFR
Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.