CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY41333	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.41	100.0
CDY42695	Canola	endoplasmic reticulum, plasma membrane	96.48	96.0
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.64	95.8
CDY41396	Canola	endoplasmic reticulum, plasma membrane	72.86	93.25
CDX70255	Canola	endoplasmic reticulum, plasma membrane	72.61	92.93
CDY71741	Canola	endoplasmic reticulum, plasma membrane	64.32	89.2
AT3G10290.1	Thale cress	plastid	79.4	89.01
CDY00919	Canola	extracellular	18.09	87.8
CDX80906	Canola	endoplasmic reticulum, plasma membrane	58.79	83.87
VIT_08s0007g08970.t01	Wine grape	plastid	65.08	81.7
PGSC0003DMT400021093	Potato	endoplasmic reticulum, plasma membrane	62.06	79.68
Solyc10g079280.1.1	Tomato	endoplasmic reticulum, plasma membrane	61.81	79.35
PGSC0003DMT400033107	Potato	endoplasmic reticulum, plasma membrane	52.26	79.09
Solyc04g016280.2.1	Tomato	endoplasmic reticulum, plasma membrane	61.56	79.03
Solyc10g079910.1.1	Tomato	endoplasmic reticulum, plasma membrane	59.8	76.77
PGSC0003DMT400076739	Potato	plasma membrane	59.3	76.13
KRH66884	Soybean	peroxisome	64.32	73.56
KRG95205	Soybean	peroxisome	64.07	72.86
CDY36312	Canola	endoplasmic reticulum, extracellular	21.11	71.19
CDY01011	Canola	plasma membrane	54.02	69.81
CDY08536	Canola	endoplasmic reticulum, plasma membrane	54.02	69.35
CDX98868	Canola	endoplasmic reticulum, plasma membrane	53.27	69.28
CDY00731	Canola	endoplasmic reticulum, plasma membrane	53.27	69.28
CDX80975	Canola	endoplasmic reticulum, plasma membrane	53.02	68.95
CDY11341	Canola	plasma membrane	53.02	68.95
CDX70125	Canola	endoplasmic reticulum, plasma membrane	53.02	68.95
CDX73882	Canola	endoplasmic reticulum, plasma membrane	53.02	68.95
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.87	66.89
Bra034102.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	80.15	56.06
CDY30085	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	43.72	48.2
CDX98058	Canola	plastid	43.47	47.92
CDY21054	Canola	plastid	43.47	47.92
CDY58615	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	43.22	47.65
CDX68051	Canola	plasma membrane	26.38	31.25
CDX79213	Canola	plasma membrane	26.38	31.25
CDX88379	Canola	plasma membrane	25.88	30.56
CDX87511	Canola	plasma membrane	25.63	30.27
CDX96572	Canola	plasma membrane	24.87	28.95
CDY38825	Canola	plasma membrane	24.62	28.66
CDY61664	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.12	27.43
CDX69775	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.87	27.14
CDY38193	Canola	peroxisome, plasma membrane, plastid	11.56	26.9
CDY63382	Canola	peroxisome, plasma membrane, plastid	11.56	26.9
CDY25067	Canola	peroxisome, plasma membrane, plastid	11.56	26.9
CDY70208	Canola	peroxisome, plasma membrane, plastid	11.56	26.9
CDX80508	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.37	26.88
CDX88177	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.37	26.88
CDY05491	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.37	26.88
CDX78413	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.62	26.86
CDX70384	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.37	26.57
CDY11527	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.12	26.36
CDX76757	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.12	26.36
CDX76991	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.61	26.09
CDX68840	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.86	25.93
CDY35355	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.36	25.8
CDX75240	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.61	25.64
CDX98450	Canola	plasma membrane	21.61	25.44
CDY39113	Canola	plasma membrane	22.61	25.0
CDX97572	Canola	plasma membrane	21.61	24.78
CDY33222	Canola	golgi, peroxisome, plasma membrane	22.11	24.44
CDY43289	Canola	plasma membrane	21.61	23.63
CDY63022	Canola	plasma membrane	21.61	23.12
CDY48700	Canola	plasma membrane	21.61	23.12
CDX93651	Canola	plasma membrane	21.36	23.04
CDX77330	Canola	plasma membrane	21.36	23.04
CDY41853	Canola	plasma membrane	21.11	22.76
CDY66383	Canola	plasma membrane	14.82	22.52
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	9.8	20.42
CDX92132	Canola	plasma membrane	15.83	20.32
CDY06643	Canola	golgi, peroxisome, plasma membrane	17.84	18.83
CDY41850	Canola	plasma membrane	13.07	18.64
CDY10201	Canola	golgi, peroxisome, plasma membrane	18.34	17.59
CDY15580	Canola	plasma membrane	17.84	17.11
CDX86520	Canola	golgi, peroxisome, plasma membrane	17.84	17.11
CDX79220	Canola	mitochondrion	15.33	12.58
CDY41331	Canola	cytosol, peroxisome, plasma membrane	0.5	0.81

Protein Annotations

EnsemblPlants:CDY53550	EnsemblPlantsGene:GSBRNA2T00010910001	GO:A0A078IR86	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44010	PANTHER:PTHR44010:SF2	PFAM:PF03151	ProteinID:CDY53550	ProteinID:CDY53550.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EDCA1F	UniProt:A0A078IR86	MapMan:35.1

Description

BnaA09g57090DBnaA09g57090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR86]

Coordinates

chrLK033212:-:56247..59642

Molecular Weight (calculated)

43990.9 Da

IEP (calculated)

10.599

GRAVY (calculated)

0.461

Length

398 amino acids

Sequence
(BLAST)

001: MILLNWFKYL KIYIDSQNQF NSALTTFTKQ SNTTIQHFSL SLSKKKKRLP FSIKPSSSPP PLPSKIQTKS SDLIMNNKKN PDQKPEMPPS SSSPKKQTLF
101: ISSLILLWYT SNIGVLLLNK FLLSNYGFKF PIFLTMCHMS ACAILSYVSI VFLKLVPLQH LKSRSQFMKV ATLSIVFCAS VVGGNVSLRY LPVSFNQAVG
201: ATTPFFTALF AYLMTFKREA WVTYGALVPV VTGVVIASGG EPGFHWFGFI MCISATAARA FKSVLQGILL SSEGEKLNSM NLMLYMSPIA VIALLPVTIV
301: MEPDVMSVTL SLARQHQYMW ILLLVNSVMA YSANLLNFLV TKHTSALTLQ VLGNAKGAVA VVISILLFRN PVTVMGIGGY SITVLGVVAY GETKRRFR

Best Arabidopsis Sequence Match ( AT3G10290.1 )
(BLAST)

001: MSSHARGKEL IPLLSFSHQK KQPNLSISST TKMNKKNPDQ KSDMSSSSSS PKKQTLFISS LIILWYTSNI GVLLLNKFLL SNYGFKFPIF LTMCHMSACA
101: ILSYVSIVFL KLVPLQYLKS RSQFLKVATL SIVFCASVVG GNISLRYLPV SFNQAVGATT PFFTALFAYI MTFKREAWVT YGALVPVVTG VVIASGGEPG
201: FHWFGFIMCI SATAARAFKS VLQGILLSSE GERLNSMNLM LYMSPIAVIA LLPVTIFMEP DVMSVTLTLG RQHKYMYILL LVNSVMAYSA NLLNFLVTKH
301: TSALTLQVLG NAKGAVAVVI SILLFRNPVT VMGIGGYSIT VLGVVAYGET KRRFR

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At3g10290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.