Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64269 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY63119 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY56711 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY43207 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY40726 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY38198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY32060 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY30718 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY19068 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY16783 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDY06070 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDX88102 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| CDX76352 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 86.48 | 94.75 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 81.97 | 94.17 |
| CDY00918 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 31.27 | 93.28 |
| VIT_08s0007g08970.t01 | Wine grape | plastid | 73.52 | 82.33 |
| Solyc04g016280.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 69.58 | 79.68 |
| PGSC0003DMT400033107 | Potato | endoplasmic reticulum, plasma membrane | 58.87 | 79.47 |
| CDY53550 | Canola | mitochondrion, plastid | 89.01 | 79.4 |
| PGSC0003DMT400021093 | Potato | endoplasmic reticulum, plasma membrane | 69.3 | 79.35 |
| Solyc10g079280.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 69.01 | 79.03 |
| CDY42695 | Canola | endoplasmic reticulum, plasma membrane | 89.01 | 79.0 |
| Solyc10g079910.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 66.76 | 76.45 |
| PGSC0003DMT400076739 | Potato | plasma membrane | 66.48 | 76.13 |
| KRH66884 | Soybean | peroxisome | 71.27 | 72.7 |
| KRG95205 | Soybean | peroxisome | 70.99 | 72.0 |
| AT3G11320.1 | Thale cress | endoplasmic reticulum, plasma membrane | 60.28 | 69.48 |
| AT5G05820.1 | Thale cress | endoplasmic reticulum, plasma membrane | 59.44 | 68.28 |
| Bra034102.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 85.07 | 53.08 |
| AT1G12500.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 47.89 | 47.09 |
| AT1G77610.1 | Thale cress | plasma membrane | 27.61 | 29.17 |
| AT1G21870.1 | Thale cress | plasma membrane | 27.89 | 29.03 |
| AT5G11230.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.63 | 25.93 |
| AT5G25400.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.35 | 25.79 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.51 | 25.07 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.51 | 24.86 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 23.1 | 24.12 |
| AT1G48230.1 | Thale cress | plasma membrane | 23.66 | 22.89 |
| AT3G17430.2 | Thale cress | plasma membrane | 23.66 | 22.4 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 21.69 | 22.0 |
| AT1G06470.2 | Thale cress | golgi, peroxisome, plasma membrane | 20.0 | 17.15 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820191 | ProteinID:AAF02813.1 | ProteinID:AEE74884.1 | ArrayExpress:AT3G10290 | EnsemblPlantsGene:AT3G10290 |
| RefSeq:AT3G10290 | TAIR:AT3G10290 | RefSeq:AT3G10290-TAIR-G | EnsemblPlants:AT3G10290.1 | TAIR:AT3G10290.1 | Unigene:At.28112 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| RefSeq:NP_187640.1 | PFAM:PF03151 | PO:PO:0000293 | PANTHER:PTHR44010 | PANTHER:PTHR44010:SF2 | UniProt:Q9SS40 |
| SUPFAM:SSF103481 | InterPro:Sugar_P_trans_dom | TMHMM:TMhelix | UniParc:UPI00000AB15B | SEG:seg | : |
Description
Probable sugar phosphate/phosphate translocator At3g10290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS40]
Coordinates
chr3:-:3183403..3185427
Molecular Weight (calculated)
38956.7 Da
IEP (calculated)
10.498
GRAVY (calculated)
0.561
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSHARGKEL IPLLSFSHQK KQPNLSISST TKMNKKNPDQ KSDMSSSSSS PKKQTLFISS LIILWYTSNI GVLLLNKFLL SNYGFKFPIF LTMCHMSACA
101: ILSYVSIVFL KLVPLQYLKS RSQFLKVATL SIVFCASVVG GNISLRYLPV SFNQAVGATT PFFTALFAYI MTFKREAWVT YGALVPVVTG VVIASGGEPG
201: FHWFGFIMCI SATAARAFKS VLQGILLSSE GERLNSMNLM LYMSPIAVIA LLPVTIFMEP DVMSVTLTLG RQHKYMYILL LVNSVMAYSA NLLNFLVTKH
301: TSALTLQVLG NAKGAVAVVI SILLFRNPVT VMGIGGYSIT VLGVVAYGET KRRFR
101: ILSYVSIVFL KLVPLQYLKS RSQFLKVATL SIVFCASVVG GNISLRYLPV SFNQAVGATT PFFTALFAYI MTFKREAWVT YGALVPVVTG VVIASGGEPG
201: FHWFGFIMCI SATAARAFKS VLQGILLSSE GERLNSMNLM LYMSPIAVIA LLPVTIFMEP DVMSVTLTLG RQHKYMYILL LVNSVMAYSA NLLNFLVTKH
301: TSALTLQVLG NAKGAVAVVI SILLFRNPVT VMGIGGYSIT VLGVVAYGET KRRFR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.