Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 90.88 | 91.14 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 90.88 | 91.14 |
| Bra008981.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 90.31 | 90.57 |
| AT5G25400.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 89.46 | 89.97 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 88.03 | 88.29 |
| Bra006092.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 87.75 | 88.0 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 87.46 | 87.71 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 83.19 | 84.15 |
| KRH61785 | Soybean | plasma membrane | 82.05 | 83.24 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 82.91 | 83.14 |
| KRH52456 | Soybean | endoplasmic reticulum | 81.48 | 82.66 |
| VIT_11s0016g05190.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 81.48 | 81.71 |
| Solyc12g006500.1.1 | Tomato | plasma membrane | 81.48 | 81.71 |
| PGSC0003DMT400062384 | Potato | plasma membrane | 80.91 | 81.14 |
| GSMUA_Achr8P09450_001 | Banana | endoplasmic reticulum, plasma membrane | 61.25 | 78.18 |
| GSMUA_Achr8P24020_001 | Banana | endoplasmic reticulum, plasma membrane | 68.95 | 75.86 |
| TraesCS1B01G322400.1 | Wheat | plasma membrane | 75.78 | 75.78 |
| TraesCS1D01G310900.1 | Wheat | plasma membrane | 76.35 | 75.71 |
| TraesCS1A01G311000.1 | Wheat | golgi | 76.35 | 75.71 |
| Os05t0494500-01 | Rice | plasma membrane | 75.78 | 75.14 |
| Zm00001d043178_P001 | Maize | plasma membrane | 75.78 | 74.93 |
| TraesCS3B01G361600.1 | Wheat | golgi | 75.78 | 74.93 |
| Zm00001d010654_P001 | Maize | plasma membrane | 76.07 | 74.79 |
| KXG33567 | Sorghum | cytosol, golgi, plasma membrane | 76.64 | 74.52 |
| TraesCS3A01G331400.1 | Wheat | peroxisome, plasma membrane, vacuole | 75.78 | 74.51 |
| KXG22255 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 75.78 | 74.51 |
| Os01t0802850-00 | Rice | cytosol, golgi, plasma membrane | 76.35 | 74.24 |
| GSMUA_Achr4P10120_001 | Banana | endoplasmic reticulum, plasma membrane | 67.24 | 74.21 |
| Zm00001d038562_P001 | Maize | plasma membrane | 75.21 | 73.95 |
| Zm00001d012562_P001 | Maize | golgi, plasma membrane, vacuole | 75.78 | 73.89 |
| GSMUA_Achr4P00290_001 | Banana | cytosol, plasma membrane, vacuole | 68.09 | 71.56 |
| TraesCS3D01G325000.1 | Wheat | peroxisome, plasma membrane, vacuole | 75.5 | 69.01 |
| GSMUA_Achr7P21260_001 | Banana | golgi, plasma membrane, vacuole | 65.81 | 68.96 |
| TraesCS5D01G155000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 70.37 | 66.94 |
| TraesCS5B01G135400.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 69.52 | 66.12 |
| TraesCS5A01G136600.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 69.23 | 65.85 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 76.64 | 65.13 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 68.66 | 63.09 |
| Os11t0139400-01 | Rice | plastid | 69.23 | 62.63 |
| EES16534 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 67.52 | 61.72 |
| Zm00001d023261_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 67.24 | 61.62 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 75.78 | 59.78 |
| Os12t0136100-00 | Rice | peroxisome | 69.23 | 56.78 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.6 | 42.94 |
| AT1G48230.1 | Thale cress | plasma membrane | 44.44 | 42.51 |
| AT3G17430.2 | Thale cress | plasma membrane | 45.01 | 42.13 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 39.6 | 39.71 |
| AT5G05820.1 | Thale cress | endoplasmic reticulum, plasma membrane | 26.21 | 29.77 |
| AT3G11320.1 | Thale cress | endoplasmic reticulum, plasma membrane | 25.93 | 29.55 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 25.93 | 29.45 |
| Os03t0622700-00 | Rice | mitochondrion | 38.46 | 28.54 |
| AT3G10290.1 | Thale cress | plastid | 25.93 | 25.63 |
| AT1G21870.1 | Thale cress | plasma membrane | 23.65 | 24.34 |
| AT1G77610.1 | Thale cress | plasma membrane | 23.08 | 24.11 |
| AT1G12500.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 23.65 | 22.99 |
| AT1G06470.2 | Thale cress | golgi, peroxisome, plasma membrane | 24.79 | 21.01 |
Protein Annotations
| MapMan:24.2.1.1.10 | EntrezGene:830993 | UniProt:A0A178UPI4 | UniProt:A0A1W6AJY6 | ProteinID:AED91650.1 | ArrayExpress:AT5G11230 |
| EnsemblPlantsGene:AT5G11230 | RefSeq:AT5G11230 | TAIR:AT5G11230 | RefSeq:AT5G11230-TAIR-G | EnsemblPlants:AT5G11230.1 | TAIR:AT5G11230.1 |
| ProteinID:CAB96658.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 |
| GO:GO:0016020 | GO:GO:0016021 | EMBL:KU977444 | RefSeq:NP_196684.1 | ProteinID:OAO95034.1 | PFAM:PF03151 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR11132 | PANTHER:PTHR11132:SF236 | UniProt:Q9LFN3 | SUPFAM:SSF103481 | InterPro:Sugar_P_trans_dom | TMHMM:TMhelix |
| UniParc:UPI000009E5C0 | SEG:seg | : | : | : | : |
Description
UDP-Arabinofuranose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJY6]
Coordinates
chr5:+:3580396..3582090
Molecular Weight (calculated)
39272.6 Da
IEP (calculated)
8.919
GRAVY (calculated)
0.530
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGGALSES VIKNIVLSYS YVAIWIFLSF TVIVYNKYIL DKKMYNWPFP ISLTMIHMSF CSTLAFLIIK VFKFVEPVKM TRETYLRSVV PIGALYALSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS DTMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVLIQILLG DKGIKLNPIT
201: SLYYVAPCCL AFLFIPWIYV EFPVLRDTSS FHLDYAIFGA NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEEEK KKIQQADEES GRLLEEREGD VEGKKNDQSG N
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS DTMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVLIQILLG DKGIKLNPIT
201: SLYYVAPCCL AFLFIPWIYV EFPVLRDTSS FHLDYAIFGA NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEEEK KKIQQADEES GRLLEEREGD VEGKKNDQSG N
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.