Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P21260_001 | Banana | golgi, plasma membrane, vacuole | 89.52 | 89.25 |
| GSMUA_Achr8P24020_001 | Banana | endoplasmic reticulum, plasma membrane | 81.44 | 85.27 |
| GSMUA_Achr4P10120_001 | Banana | endoplasmic reticulum, plasma membrane | 80.84 | 84.91 |
| GSMUA_Achr8P09450_001 | Banana | endoplasmic reticulum, plasma membrane | 69.76 | 84.73 |
| Zm00001d012562_P001 | Maize | golgi, plasma membrane, vacuole | 80.84 | 75.0 |
| Os05t0494500-01 | Rice | plasma membrane | 79.04 | 74.58 |
| KXG33567 | Sorghum | cytosol, golgi, plasma membrane | 80.54 | 74.52 |
| KXG22255 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 79.64 | 74.51 |
| Zm00001d043178_P001 | Maize | plasma membrane | 79.04 | 74.37 |
| Zm00001d010654_P001 | Maize | plasma membrane | 79.34 | 74.23 |
| TraesCS1A01G311000.1 | Wheat | golgi | 78.44 | 74.01 |
| TraesCS1D01G310900.1 | Wheat | plasma membrane | 78.44 | 74.01 |
| TraesCS1B01G322400.1 | Wheat | plasma membrane | 77.54 | 73.79 |
| Zm00001d038562_P001 | Maize | plasma membrane | 78.74 | 73.67 |
| TraesCS3B01G361600.1 | Wheat | golgi | 77.84 | 73.24 |
| TraesCS3A01G331400.1 | Wheat | peroxisome, plasma membrane, vacuole | 78.14 | 73.11 |
| Os01t0802850-00 | Rice | cytosol, golgi, plasma membrane | 78.74 | 72.85 |
| VIT_11s0016g05190.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 74.55 | 71.14 |
| KRH65971 | Soybean | endoplasmic reticulum, extracellular | 26.65 | 70.63 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.05 | 70.52 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.05 | 70.52 |
| AT5G25400.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 73.65 | 70.49 |
| Bra009838.1-P | Field mustard | golgi, plasma membrane, vacuole | 72.75 | 70.23 |
| Bra020498.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 72.75 | 70.23 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.46 | 69.94 |
| CDX75240 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.05 | 69.52 |
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.75 | 69.43 |
| CDX68840 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.75 | 69.23 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.16 | 68.86 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 72.16 | 68.86 |
| Bra008981.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 72.16 | 68.86 |
| Bra006092.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 71.86 | 68.57 |
| VIT_04s0008g05300.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 71.56 | 68.29 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 71.56 | 68.29 |
| CDY35355 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.36 | 68.12 |
| CDX76991 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.36 | 68.12 |
| AT5G11230.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 71.56 | 68.09 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 70.66 | 68.01 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 71.26 | 68.0 |
| Bra007795.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 70.96 | 67.91 |
| CDX76757 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.96 | 67.91 |
| Bra034256.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 70.06 | 67.83 |
| CDY11527 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.66 | 67.62 |
| Bra011343.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 70.66 | 67.24 |
| TraesCS3D01G325000.1 | Wheat | peroxisome, plasma membrane, vacuole | 77.25 | 67.19 |
| Solyc12g006500.1.1 | Tomato | plasma membrane | 70.36 | 67.14 |
| PGSC0003DMT400062384 | Potato | plasma membrane | 69.46 | 66.29 |
| TraesCS5A01G136600.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 71.26 | 64.5 |
| TraesCS5D01G155000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 71.26 | 64.5 |
| TraesCS5B01G135400.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 70.66 | 63.96 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 79.04 | 63.92 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 69.76 | 60.99 |
| Zm00001d023261_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 68.86 | 60.05 |
| EES16534 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 68.56 | 59.64 |
| Os11t0139400-01 | Rice | plastid | 69.16 | 59.54 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 77.84 | 58.43 |
| Os12t0136100-00 | Rice | peroxisome | 69.46 | 54.21 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 41.32 | 37.0 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 41.32 | 36.9 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 31.74 | 33.87 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 34.43 | 33.14 |
| Os03t0622700-00 | Rice | mitochondrion | 36.23 | 25.58 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 23.65 | 25.08 |
| GSMUA_Achr5P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 17.96 | 22.81 |
| GSMUA_Achr6P33090_001 | Banana | endoplasmic reticulum, plasma membrane | 17.66 | 22.43 |
| GSMUA_Achr9P04310_001 | Banana | endoplasmic reticulum, plasma membrane | 17.66 | 22.43 |
| GSMUA_Achr7P22640_001 | Banana | mitochondrion | 23.65 | 20.73 |
| GSMUA_Achr1P08040_001 | Banana | plastid | 23.05 | 20.16 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 20.36 | 19.94 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 20.06 | 19.65 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 17.07 | 19.39 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 26.95 | 18.71 |
| GSMUA_Achr6P14700_001 | Banana | cytosol | 26.05 | 17.13 |
| GSMUA_Achr7P24860_001 | Banana | nucleus, peroxisome, plasma membrane | 24.25 | 10.84 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P00290_001 | EnsemblPlants:GSMUA_Achr4T00290_001 | EnsemblPlantsGene:GSMUA_Achr4G00290_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | ncoils:Coil | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF237 | PFAM:PF03151 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00029682C7 | UniProt:M0SJU6 | MapMan:24.2.1.1.10 | : | : |
Description
domain of unknown function, DUF250 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G00290_001]
Coordinates
chr4:+:249752..251338
Molecular Weight (calculated)
36315.2 Da
IEP (calculated)
9.771
GRAVY (calculated)
0.650
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGREGSGGGG GAVSEGVLKK VLLSYAYVAI WIFLSFTVIV YNKYILDPKM YGWPFPISLT MIHMAFCSTL AILLVRVLRL VDPPSSPPMT RALYLSSVVP
101: IGALYSLSLW FSNSAYIYLS VSFIQMLKAL MPVAVYSIGI LFKKESFRTS SMLNMLSISF GATRLVLIQI LLTSKGISLN PITSLYYVAP CCLAFLLVPW
201: SVVELPILRA RSASSLRPDL LIFGTNSLCA FALNLAVFLL VGKTSALTMN VAGVVKDWLL IAFSWSVIRD TVTAINLFGY AIAFLGVAYY NHVKLQALKA
301: KEAQKKAAQA DDEAGKLLDQ VDGSGGDRKG DSQA
101: IGALYSLSLW FSNSAYIYLS VSFIQMLKAL MPVAVYSIGI LFKKESFRTS SMLNMLSISF GATRLVLIQI LLTSKGISLN PITSLYYVAP CCLAFLLVPW
201: SVVELPILRA RSASSLRPDL LIFGTNSLCA FALNLAVFLL VGKTSALTMN VAGVVKDWLL IAFSWSVIRD TVTAINLFGY AIAFLGVAYY NHVKLQALKA
301: KEAQKKAAQA DDEAGKLLDQ VDGSGGDRKG DSQA
001: MGKGGSLSEG VIKNIIISYT YVAIWIFLSF TVIVYNKYIL DKKMYDWPFP ISLTMIHMSF CSTLAFLLIK VFKFVEPVSM SRDTYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
Arabidopsis Description
UDP-Arabinofuranose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ8]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.