CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69775	Canola	endoplasmic reticulum, plasma membrane, vacuole	99.43	99.43
Bra008981.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	98.86	98.86
CDX78413	Canola	endoplasmic reticulum, plasma membrane, vacuole	92.86	92.86
CDX70384	Canola	endoplasmic reticulum, plasma membrane, vacuole	92.29	92.29
CDY05491	Canola	endoplasmic reticulum, plasma membrane, vacuole	90.86	91.91
AT5G11230.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	91.14	90.88
CDX88177	Canola	endoplasmic reticulum, plasma membrane, vacuole	89.43	90.46
CDX80508	Canola	endoplasmic reticulum, plasma membrane, vacuole	88.86	89.88
CDX68840	Canola	endoplasmic reticulum, plasma membrane, vacuole	87.71	87.46
CDX75240	Canola	endoplasmic reticulum, plasma membrane, vacuole	87.43	87.18
CDY11527	Canola	endoplasmic reticulum, plasma membrane, vacuole	86.29	86.53
CDX76757	Canola	endoplasmic reticulum, plasma membrane, vacuole	86.0	86.25
KRH61785	Soybean	plasma membrane	84.29	85.26
CDX76991	Canola	endoplasmic reticulum, plasma membrane, vacuole	83.43	84.64
KRH52456	Soybean	endoplasmic reticulum	82.86	83.81
CDY35355	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.29	83.48
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	82.86	82.86
Solyc12g006500.1.1	Tomato	plasma membrane	81.71	81.71
PGSC0003DMT400062384	Potato	plasma membrane	81.14	81.14
GSMUA_Achr8P09450_001	Banana	endoplasmic reticulum, plasma membrane	62.0	78.91
TraesCS3B01G361600.1	Wheat	golgi	78.0	76.9
TraesCS3A01G331400.1	Wheat	peroxisome, plasma membrane, vacuole	78.29	76.75
TraesCS1B01G322400.1	Wheat	plasma membrane	76.86	76.64
Zm00001d043178_P001	Maize	plasma membrane	77.71	76.62
TraesCS1A01G311000.1	Wheat	golgi	77.43	76.55
TraesCS1D01G310900.1	Wheat	plasma membrane	77.43	76.55
KXG22255	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	77.71	76.19
KXG33567	Sorghum	cytosol, golgi, plasma membrane	78.57	76.18
GSMUA_Achr8P24020_001	Banana	endoplasmic reticulum, plasma membrane	69.43	76.18
Zm00001d010654_P001	Maize	plasma membrane	77.43	75.91
Zm00001d012562_P001	Maize	golgi, plasma membrane, vacuole	78.0	75.83
GSMUA_Achr4P10120_001	Banana	endoplasmic reticulum, plasma membrane	68.86	75.79
Zm00001d038562_P001	Maize	plasma membrane	77.14	75.63
Os01t0802850-00	Rice	cytosol, golgi, plasma membrane	78.0	75.62
Os05t0494500-01	Rice	plasma membrane	76.29	75.42
GSMUA_Achr4P00290_001	Banana	cytosol, plasma membrane, vacuole	69.43	72.75
TraesCS3D01G325000.1	Wheat	peroxisome, plasma membrane, vacuole	77.14	70.31
GSMUA_Achr7P21260_001	Banana	golgi, plasma membrane, vacuole	66.57	69.55
TraesCS5D01G155000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.29	66.67
TraesCS5A01G136600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	69.43	65.85
TraesCS5B01G135400.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	69.43	65.85
HORVU1Hr1G067910.1	Barley	golgi, peroxisome, plastid	77.43	65.62
Os11t0139400-01	Rice	plastid	70.57	63.66
Zm00001d023261_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	69.43	63.45
HORVU5Hr1G044230.1	Barley	mitochondrion, peroxisome, plasma membrane, plastid	69.14	63.35
EES16534	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	68.57	62.5
HORVU3Hr1G078650.1	Barley	cytosol, peroxisome, plastid	78.0	61.35
Os12t0136100-00	Rice	peroxisome	70.57	57.71
CDX98450	Canola	plasma membrane	41.71	43.2
CDY43289	Canola	plasma membrane	44.29	42.58
CDY41853	Canola	plasma membrane	44.86	42.55
CDX77330	Canola	plasma membrane	44.57	42.28
CDX93651	Canola	plasma membrane	44.57	42.28
CDY63022	Canola	plasma membrane	44.86	42.2
CDX97572	Canola	plasma membrane	41.71	42.07
CDY48700	Canola	plasma membrane	44.57	41.94
CDY66383	Canola	plasma membrane	31.14	41.6
CDY39113	Canola	plasma membrane	42.0	40.83
CDY33222	Canola	golgi, peroxisome, plasma membrane	41.71	40.56
CDY36312	Canola	endoplasmic reticulum, extracellular	11.43	33.9
CDX92132	Canola	plasma membrane	30.0	33.87
CDY41850	Canola	plasma membrane	26.0	32.62
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	13.43	31.76
CDY01011	Canola	plasma membrane	27.14	30.84
CDX73882	Canola	endoplasmic reticulum, plasma membrane	26.86	30.72
CDX80975	Canola	endoplasmic reticulum, plasma membrane	26.86	30.72
CDX98868	Canola	endoplasmic reticulum, plasma membrane	26.86	30.72
CDY00731	Canola	endoplasmic reticulum, plasma membrane	26.86	30.72
CDY11341	Canola	plasma membrane	26.86	30.72
CDY08536	Canola	endoplasmic reticulum, plasma membrane	27.14	30.65
CDX70125	Canola	endoplasmic reticulum, plasma membrane	26.57	30.39
CDY71741	Canola	endoplasmic reticulum, plasma membrane	24.86	30.31
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.29	30.25
CDX80906	Canola	endoplasmic reticulum, plasma membrane	24.0	30.11
CDX70255	Canola	endoplasmic reticulum, plasma membrane	26.57	29.9
CDY41396	Canola	endoplasmic reticulum, plasma membrane	26.57	29.9
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY41333	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	27.43	29.63
Os03t0622700-00	Rice	mitochondrion	39.43	29.18
CDY21054	Canola	plastid	25.14	24.38
CDY58615	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	25.14	24.38
CDY53550	Canola	mitochondrion, plastid	27.43	24.12
CDX68051	Canola	plasma membrane	23.14	24.11
CDX98058	Canola	plastid	24.86	24.1
CDY30085	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	24.86	24.1
CDX87511	Canola	plasma membrane	23.14	24.04
CDX88379	Canola	plasma membrane	23.14	24.04
CDY42695	Canola	endoplasmic reticulum, plasma membrane	27.43	24.0
CDY38825	Canola	plasma membrane	23.43	23.98
CDX96572	Canola	plasma membrane	23.14	23.68
CDX79213	Canola	plasma membrane	22.57	23.51
CDY00919	Canola	extracellular	5.43	23.17
CDY06643	Canola	golgi, peroxisome, plasma membrane	23.14	21.49
CDY10201	Canola	golgi, peroxisome, plasma membrane	25.14	21.2
CDY25067	Canola	peroxisome, plasma membrane, plastid	10.29	21.05
CDY38193	Canola	peroxisome, plasma membrane, plastid	10.29	21.05
CDY63382	Canola	peroxisome, plasma membrane, plastid	10.29	21.05
CDY70208	Canola	peroxisome, plasma membrane, plastid	10.29	21.05
CDY15580	Canola	plasma membrane	24.29	20.48
CDX86520	Canola	golgi, peroxisome, plasma membrane	24.0	20.24
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	7.71	14.14
CDX79220	Canola	mitochondrion	14.57	10.52
CDY41331	Canola	cytosol, peroxisome, plasma membrane	0.57	0.81

Protein Annotations

EnsemblPlants:CDY61664	EnsemblPlantsGene:GSBRNA2T00034157001	GO:A0A078J9D3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR11132	PANTHER:PTHR11132:SF236	PFAM:PF03151	ProteinID:CDY61664	ProteinID:CDY61664.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE0F79	UniProt:A0A078J9D3	MapMan:24.2.1.1.10

Description

BnaCnng38240DBnaCnng38240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9D3]

Coordinates

chrLK034023:-:10783..11835

Molecular Weight (calculated)

38760.9 Da

IEP (calculated)

8.729

GRAVY (calculated)

0.581

Length

350 amino acids

Sequence
(BLAST)

001: MGKGGTLSDS VIKKIVLSYS YVAIWIFLSF TVIVYNKYIL DKKMYNWPFP ISLTMIHMSF CSTLAVLLIK VFKFVDPVSM SRETYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLLKKEGFKS DTMTNMLSIS FGVAIAAYGE ARFDVFGVIL QLGAVAFEAT RLVLIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIYV EFPVLRDTSS FHFDYAIFGT NSLCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKANEAQK KVQQGDEESG RLLEEKGGGD GEGKKIESED

Best Arabidopsis Sequence Match ( AT5G11230.1 )
(BLAST)

001: MGKGGALSES VIKNIVLSYS YVAIWIFLSF TVIVYNKYIL DKKMYNWPFP ISLTMIHMSF CSTLAFLIIK VFKFVEPVKM TRETYLRSVV PIGALYALSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS DTMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVLIQILLG DKGIKLNPIT
201: SLYYVAPCCL AFLFIPWIYV EFPVLRDTSS FHLDYAIFGA NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEEEK KKIQQADEES GRLLEEREGD VEGKKNDQSG N

Arabidopsis Description

UDP-Arabinofuranose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJY6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.