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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61785 Soybean plasma membrane 95.95 95.95
Bra009838.1-P Field mustard golgi, plasma membrane, vacuole 83.81 83.81
Bra020498.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 83.81 83.81
CDX88177 Canola endoplasmic reticulum, plasma membrane, vacuole 83.81 83.81
AT2G25520.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 83.81 83.57
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 83.53 83.53
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 84.39 83.43
AT5G25400.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 83.81 83.09
Bra007795.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 83.81 83.09
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 82.95 82.95
AT4G32390.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 83.81 82.86
VIT_11s0016g05190.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 83.81 82.86
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 83.81 82.86
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 83.81 82.86
Bra006092.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 83.81 82.86
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 83.53 82.81
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 83.81 82.62
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 83.53 82.34
Bra008981.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 83.24 82.29
KRH20279 Soybean plasma membrane 81.79 82.27
KRH03703 Soybean plasma membrane 81.79 82.03
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 82.95 82.0
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 82.66 81.95
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 81.5 81.74
AT5G11230.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 82.66 81.48
Bra034256.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 81.21 81.45
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 80.35 80.58
Solyc12g006500.1.1 Tomato plasma membrane 81.5 80.57
Bra011343.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 81.21 80.06
PGSC0003DMT400062384 Potato plasma membrane 80.92 80.0
KRH65971 Soybean endoplasmic reticulum, extracellular 25.14 69.05
KRH13610 Soybean endoplasmic reticulum, plasma membrane, vacuole 39.88 41.44
KRH43853 Soybean plasma membrane 39.6 41.14
KRH19508 Soybean plasma membrane 43.93 39.9
KRH37626 Soybean mitochondrion, plasma membrane 43.64 39.32
KRH12712 Soybean endoplasmic reticulum 43.35 39.06
KRG96589 Soybean endoplasmic reticulum, plasma membrane, vacuole 43.35 38.96
KRH02464 Soybean endoplasmic reticulum, plasma membrane 39.6 38.7
KRH68321 Soybean plasma membrane 43.06 32.75
KRH46459 Soybean endoplasmic reticulum, plasma membrane 26.01 29.22
KRH73122 Soybean endoplasmic reticulum, plasma membrane 25.72 29.09
KRG97791 Soybean endoplasmic reticulum, plasma membrane 25.72 28.99
KRG98354 Soybean endoplasmic reticulum, plasma membrane 25.72 28.9
KRH15007 Soybean endoplasmic reticulum, plasma membrane 25.43 28.76
KRH75798 Soybean endoplasmic reticulum, extracellular 25.14 27.71
KRH66000 Soybean endoplasmic reticulum, plasma membrane 24.86 27.56
KRH66884 Soybean peroxisome 26.59 26.44
KRG95205 Soybean peroxisome 26.59 26.29
KRH57328 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 25.72 25.14
KRH04064 Soybean cytosol, peroxisome, plasma membrane, plastid 25.14 24.51
KRH33048 Soybean extracellular, plasma membrane 8.09 23.93
KRH31077 Soybean plastid 25.72 21.81
KRH16322 Soybean plasma membrane 21.1 21.34
KRH18757 Soybean plasma membrane 21.1 21.34
KRH58008 Soybean mitochondrion, plasma membrane 10.69 21.14
KRH64681 Soybean plasma membrane 19.94 20.0
KRH53233 Soybean plasma membrane 19.94 20.0
KRG98850 Soybean cytosol, peroxisome, plasma membrane 25.14 17.43
KRH37964 Soybean cytosol, peroxisome, plasma membrane 24.86 16.44
Protein Annotations
EMBL:ACUP02003419EnsemblPlants:KRH52456EnsemblPlantsGene:GLYMA_06G069300EntrezGene:100797117GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:Sugar_P_trans_domPANTHER:PTHR11132PANTHER:PTHR11132:SF236PFAM:PF03151ProteinID:KRH52455.1
ProteinID:KRH52456ProteinID:KRH52456.1SEG:segTMHMM:TMhelixUniParc:UPI000233A2C5UniProt:I1K8W1
MapMan:24.2.1.1.10:::::
Description
hypothetical protein
Coordinates
chr6:+:5311935..5313768
Molecular Weight (calculated)
38641.7 Da
IEP (calculated)
9.107
GRAVY (calculated)
0.540
Length
346 amino acids
Sequence
(BLAST)
001: MGKGGSLSEG VMKKIVLSYS YVAIWIFLSF SVIVYNKYIL DKKMYNWPFP ISLTMIHMSF CATLAILLVR VLRIVEPVSM SRHVYLSSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLLRKESYKN DTMFNMLSIS LGVGVAAYGE ARFDAWGVLL QLGAVAFEAT RLVMIQILLT SKGISLNPIT
201: SLYYVAPCCL VFLSIPWIFV EYPVLRDTSS FHFDFVIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGLAFL
301: GVAYYNHSKL QALKAKEAQK KTAQPDEEEG SLLQDRDDNK RNDQQN
Best Arabidopsis Sequence Match ( AT2G25520.1 )
(BLAST)
001: MGKGRALSDG VIKKIILSYT YVAIWIFLSF TVIVYNKYIL DKKMYNWPFP ITLTMIHMGF CSSLAVILIK VFKVVEPVSM SRETYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLLKKETFKS QTMTNMLSIS FGVAIAAYGE AKFDGWGVFL QLGAVAFEAT RLVLIQILLT SKGINLNPIT
201: SLYYVAPCCL VFLSVPWIFV EFPVLRDTSS FHFDFVIFGT NSVCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGLAFL
301: GVGYYNHCKL QALKAKDAQK KVQASDDEAG KLLEERESEA KRNETQD
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At2g25520 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKJ7]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.