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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002403.1-P
Bra003423.1-P
Bra006619.1-P
Bra007547.1-P
Bra014481.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G14410.1 Bra003423.1-P AT3G60600.1 21798944
AT3G14410.1 Bra007547.1-P AT3G60600.1 21798944
AT3G14410.1 Bra014481.1-P AT3G60600.1 21798944
AT3G14410.1 Bra002403.1-P AT5G22290.1 21798944
AT3G14410.1 Bra006619.1-P AT5G22290.1 21798944
AT3G14410.1 Bra020182.1-P AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97572 Canola plasma membrane 100.0 100.0
CDX98450 Canola plasma membrane 96.54 99.11
AT3G14410.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 93.37 95.29
Bra021553.1-P Field mustard extracellular, plasma membrane, vacuole 77.23 94.04
Solyc10g007610.2.1 Tomato plasma membrane 81.27 83.68
PGSC0003DMT400054846 Potato plasma membrane 81.27 83.68
KRH13610 Soybean endoplasmic reticulum, plasma membrane, vacuole 79.54 82.88
KRH43853 Soybean plasma membrane 79.25 82.58
VIT_15s0046g00460.t01 Wine grape cytosol, plasma membrane, vacuole 80.12 82.49
Solyc07g056530.2.1 Tomato plasma membrane, vacuole 79.54 81.9
PGSC0003DMT400071049 Potato plasma membrane, vacuole 48.13 79.52
GSMUA_Achr9P30380_001 Banana plasma membrane 64.84 71.89
GSMUA_Achr6P19870_001 Banana golgi, plasma membrane, vacuole 71.47 71.47
Zm00001d024708_P001 Maize plasma membrane 67.44 66.1
Os08t0135100-01 Rice peroxisome, plasma membrane, vacuole 66.28 65.71
EES14504 Sorghum golgi, peroxisome, plasma membrane 67.44 64.46
TraesCS7A01G309100.1 Wheat plasma membrane 65.71 63.33
TraesCS7D01G305800.1 Wheat plasma membrane 65.71 63.16
TraesCS7B01G209100.1 Wheat plasma membrane 65.42 63.06
HORVU7Hr1G073550.1 Barley plastid 65.71 56.3
Bra034256.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.23 43.48
Bra018714.1-P Field mustard plasma membrane 46.11 43.36
Bra007795.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.52 43.27
Bra021246.1-P Field mustard plasma membrane 45.82 42.74
Bra020498.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.07 42.2
Bra009838.1-P Field mustard golgi, plasma membrane, vacuole 42.07 42.2
Bra014116.1-P Field mustard plasma membrane 44.67 42.01
Bra006092.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.07 41.71
Bra008981.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 41.79 41.43
Bra011343.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 41.5 41.03
Bra001397.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 13.26 31.08
Bra014117.1-P Field mustard plasma membrane 24.5 30.47
Bra005868.1-P Field mustard endoplasmic reticulum, plasma membrane 23.92 26.95
Bra009137.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 23.63 26.8
Bra005796.1-P Field mustard endoplasmic reticulum, plasma membrane 21.61 26.79
Bra009481.1-P Field mustard endoplasmic reticulum, plasma membrane 23.63 26.37
Bra003677.1-P Field mustard plasma membrane 25.36 26.19
Bra034851.1-P Field mustard endoplasmic reticulum, plasma membrane 23.34 26.05
Bra015662.1-P Field mustard plasma membrane 24.78 25.52
Bra016403.1-P Field mustard plasma membrane 24.78 25.07
Bra022215.1-P Field mustard cytosol, extracellular, plasma membrane 25.65 22.47
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 25.36 22.0
Bra016769.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome, plastid 22.48 21.61
Bra001398.1-P Field mustard extracellular, golgi, vacuole 9.51 21.43
Bra019771.1-P Field mustard plastid 22.19 21.33
Bra030654.1-P Field mustard plasma membrane 25.36 20.8
Bra034102.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 24.78 15.11
Protein Annotations
EnsemblPlants:Bra027340.1EnsemblPlants:Bra027340.1-PEnsemblPlantsGene:Bra027340GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domPANTHER:PTHR11132PANTHER:PTHR11132:SF235PFAM:PF03151SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0002547DC3UniProt:M4EEX8MapMan:24.2.1.1.10::
Description
AT3G14410 (E=5e-173) | transporter-related
Coordinates
chrA05:+:20417764..20419835
Molecular Weight (calculated)
38367.0 Da
IEP (calculated)
8.434
GRAVY (calculated)
0.752
Length
347 amino acids
Sequence
(BLAST)
001: MADRSRGFMR DEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMEILVKRK GIKLNPISLM
201: YYVSPCSAVC LFVPWIFLEK SKMDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTVIN LFGYAIAIAG
301: VAAYNNHKLK KEASRVTSET PGDGESIPLV SLPNTQRDDT DVVSHQS
Best Arabidopsis Sequence Match ( AT3G14410.1 )
(BLAST)
001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.