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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P28400_001 Banana endoplasmic reticulum, plasma membrane 86.49 48.67
GSMUA_Achr6P33090_001 Banana endoplasmic reticulum, plasma membrane 86.49 48.67
CDX73882 Canola endoplasmic reticulum, plasma membrane 100.0 48.37
CDY00731 Canola endoplasmic reticulum, plasma membrane 100.0 48.37
GSMUA_Achr9P04310_001 Banana endoplasmic reticulum, plasma membrane 85.14 47.91
Bra009137.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 97.97 47.39
AT3G11320.1 Thale cress endoplasmic reticulum, plasma membrane 97.97 47.08
Bra034851.1-P Field mustard endoplasmic reticulum, plasma membrane 98.65 46.95
Bra005868.1-P Field mustard endoplasmic reticulum, plasma membrane 94.59 45.45
VIT_13s0019g03270.t01 Wine grape endoplasmic reticulum, plasma membrane 93.92 45.42
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 89.86 45.24
KRH15007 Soybean endoplasmic reticulum, plasma membrane 92.57 44.77
KRG97791 Soybean endoplasmic reticulum, plasma membrane 92.57 44.63
KRH73122 Soybean endoplasmic reticulum, plasma membrane 91.89 44.44
PGSC0003DMT400069910 Potato endoplasmic reticulum, plasma membrane 91.22 44.12
Solyc05g052790.2.1 Tomato endoplasmic reticulum, plasma membrane 91.22 43.69
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 91.22 42.86
VIT_06s0004g05910.t01 Wine grape endoplasmic reticulum, plasma membrane 87.84 42.62
VIT_08s0007g01690.t01 Wine grape endoplasmic reticulum, plasma membrane 86.49 41.83
TraesCS4B01G197600.1 Wheat golgi 88.51 40.68
TraesCS4A01G106700.1 Wheat plastid 88.51 40.68
TraesCS4D01G198100.1 Wheat plastid 88.51 40.68
Os03t0286300-01 Rice golgi, plasma membrane, plastid 87.16 40.06
HORVU4Hr1G057100.4 Barley endoplasmic reticulum, plasma membrane, plastid 88.51 40.06
KXG39624 Sorghum plastid 87.16 39.69
EER99970 Sorghum golgi, plasma membrane, plastid 83.11 38.8
Zm00001d028713_P001 Maize plasma membrane 84.46 38.58
Zm00001d047754_P001 Maize plastid 84.46 38.58
Bra005796.1-P Field mustard endoplasmic reticulum, plasma membrane 67.57 35.71
GSMUA_Achr7P22640_001 Banana mitochondrion 89.86 34.91
KRH31077 Soybean plastid 91.89 33.33
Bra009481.1-P Field mustard endoplasmic reticulum, plasma membrane 69.59 33.12
Bra019771.1-P Field mustard plastid 66.22 27.15
Bra016769.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome, plastid 66.22 27.15
Bra034102.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 68.24 17.75
Bra021553.1-P Field mustard extracellular, plasma membrane, vacuole 31.76 16.49
Bra014117.1-P Field mustard plasma membrane 30.41 16.13
Bra007795.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.78 14.33
Bra015662.1-P Field mustard plasma membrane 32.43 14.24
Bra006092.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.11 14.0
Bra008981.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 33.11 14.0
Bra003677.1-P Field mustard plasma membrane 31.76 13.99
Bra034256.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 32.43 13.91
Bra020498.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 32.43 13.87
Bra011343.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 32.43 13.68
Bra009838.1-P Field mustard golgi, plasma membrane, vacuole 31.76 13.58
Bra016403.1-P Field mustard plasma membrane 31.08 13.41
Bra027340.1-P Field mustard plasma membrane 31.08 13.26
KRH58008 Soybean mitochondrion, plasma membrane 15.54 13.14
Bra018714.1-P Field mustard plasma membrane 30.41 12.2
Bra014116.1-P Field mustard plasma membrane 30.41 12.2
Bra021246.1-P Field mustard plasma membrane 30.41 12.1
Bra030654.1-P Field mustard plasma membrane 22.97 8.04
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 21.62 8.0
Bra022215.1-P Field mustard cytosol, extracellular, plasma membrane 16.22 6.06
Bra001398.1-P Field mustard extracellular, golgi, vacuole 2.03 1.95
KRH33048 Soybean extracellular, plasma membrane 0.0 0.0
Protein Annotations
EnsemblPlants:Bra001397.1EnsemblPlants:Bra001397.1-PEnsemblPlantsGene:Bra001397GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domPANTHER:PTHR44010PANTHER:PTHR44010:SF5PFAM:PF03151SUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI0002540712UniProt:M4CB18MapMan:35.1:::
Description
AT3G11320 (E=6e-075) | organic anion transmembrane transporter
Coordinates
chrA03:-:16179925..16180565
Molecular Weight (calculated)
15950.2 Da
IEP (calculated)
10.267
GRAVY (calculated)
0.868
Length
148 amino acids
Sequence
(BLAST)
001: MCVAATAARA LKSVLQGILL SSEGEKLNSM NLLLYMAPIA VVFLLPATLI MEKNVVGITI ALARDDFRIV WYLLFNSALA YFVNLTNFLV TKHTSALTLQ
101: VLGNAKGAVA VVVSILIFKN PVSVTGMLGY SLTVIGVILY SEAKKRSK
Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.