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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:golgi, plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG39624 Sorghum plastid 87.07 84.92
GSMUA_Achr6P33090_001 Banana endoplasmic reticulum, plasma membrane 70.35 84.79
GSMUA_Achr9P04310_001 Banana endoplasmic reticulum, plasma membrane 69.72 84.03
Bra001397.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 38.8 83.11
GSMUA_Achr5P28400_001 Banana endoplasmic reticulum, plasma membrane 68.45 82.51
PGSC0003DMT400069910 Potato endoplasmic reticulum, plasma membrane 79.5 82.35
Solyc05g052790.2.1 Tomato endoplasmic reticulum, plasma membrane 79.5 81.55
CDY00731 Canola endoplasmic reticulum, plasma membrane 78.55 81.37
CDY36312 Canola endoplasmic reticulum, extracellular 30.28 81.36
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 37.85 81.08
CDX73882 Canola endoplasmic reticulum, plasma membrane 78.23 81.05
CDY11341 Canola plasma membrane 78.23 81.05
CDY01011 Canola plasma membrane 78.55 80.84
CDX80975 Canola endoplasmic reticulum, plasma membrane 77.92 80.72
CDY08536 Canola endoplasmic reticulum, plasma membrane 78.86 80.65
Bra005868.1-P Field mustard endoplasmic reticulum, plasma membrane 78.23 80.52
AT3G11320.1 Thale cress endoplasmic reticulum, plasma membrane 78.23 80.52
Bra034851.1-P Field mustard endoplasmic reticulum, plasma membrane 78.86 80.39
AT5G05820.1 Thale cress endoplasmic reticulum, plasma membrane 78.23 80.26
CDX98868 Canola endoplasmic reticulum, plasma membrane 76.97 79.74
CDX70125 Canola endoplasmic reticulum, plasma membrane 76.66 79.41
Bra009137.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 76.34 79.08
VIT_06s0004g05910.t01 Wine grape endoplasmic reticulum, plasma membrane 75.71 78.69
KRG98354 Soybean endoplasmic reticulum, plasma membrane 75.39 77.6
KRH46459 Soybean endoplasmic reticulum, plasma membrane 75.08 77.27
Bra001398.1-P Field mustard extracellular, golgi, vacuole 36.91 75.97
CDY00919 Canola extracellular 19.24 74.39
EES18936 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 66.88 63.28
EES13163 Sorghum plasma membrane 32.49 29.77
EES13196 Sorghum plasma membrane 31.55 29.15
KXG33567 Sorghum cytosol, golgi, plasma membrane 28.08 24.65
KXG22255 Sorghum endoplasmic reticulum, plasma membrane, vacuole 27.44 24.37
EES16534 Sorghum endoplasmic reticulum, plasma membrane, plastid, vacuole 27.76 22.92
EER93603 Sorghum plasma membrane 25.87 21.69
EES14504 Sorghum golgi, peroxisome, plasma membrane 22.71 19.83
KXG33369 Sorghum cytosol, peroxisome, plasma membrane 22.71 15.38
KXG19328 Sorghum peroxisome 20.5 14.94
Protein Annotations
EnsemblPlants:EER99970EnsemblPlantsGene:SORBI_3002G431000EntrezGene:8054477GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domPANTHER:PTHR44010PANTHER:PTHR44010:SF5PFAM:PF03151ProteinID:EER99970ProteinID:EER99970.1
RefSeq:XP_002463449.1SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0001A84939UniProt:C5X6H4
MapMan:35.1:::::
Description
hypothetical protein
Coordinates
chr2:-:77665013..77667177
Molecular Weight (calculated)
34265.0 Da
IEP (calculated)
10.200
GRAVY (calculated)
0.780
Length
317 amino acids
Sequence
(BLAST)
001: MTGKDAAAGG GGGKGRLFTV GLVTAWYSSN IGVLLLNKYL LSNYGFKYPI FLTMCHMSAC SLFSYAAIAW LRIVPMQLPR SRLQLAKIAA LSLVFCASVV
101: SGNISLRYLP VSFNQAVGAT TPFFTAVFAY LMTVKRESFL TYLALVPVVT GVIIASGGEP SFNLFGFIMC VGATAARALK TVLQGILMSS DGEKINSMNL
201: LMYMAPIAVL LLVPATIFME DNVVVITIQL ARKDINIIWY LLFNSSLAYF VNLTNFLVTK HTSALTLQVL GNAKGAVAVV ISILIFRNPV SITGMLGYTL
301: TVIGVLLYSE AKKRTKQ
Best Arabidopsis Sequence Match ( AT3G11320.1 )
(BLAST)
001: MKIAANGRFF TIGLVASWYS SNIGVLLLNK YLLSNYGFKY PIFLTMCHMT ACSLLSYVAI AWMKMVPMQT IRSRVQFLKI AALSLVFCVS VVFGNISLRF
101: LPVSFNQAIG ATTPFFTAVF AYLITFKREA WLTYFTLVPV VTGVVIASGS EPSFHLFGFI MCIAATAARA LKSVLQGILL SSEGEKLNSM NLLLYMAPIA
201: VVFLLPATLI MEKNVVGITI ALARDDFRIV WYLLFNSALA YFVNLTNFLV TKHTSALTLQ VLGNAKGAVA VVVSILIFRN PVSVTGMLGY SLTVCGVILY
301: SEAKKRSK
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g11320 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF09]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.