Factsheet for VIT_06s0004g05910.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001397.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.62	87.84
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	41.64	85.81
CDY36312	Canola	endoplasmic reticulum, extracellular	33.11	85.59
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	85.57	85.29
CDY11341	Canola	plasma membrane	84.59	84.31
CDX80975	Canola	endoplasmic reticulum, plasma membrane	84.26	83.99
Bra005868.1-P	Field mustard	endoplasmic reticulum, plasma membrane	84.59	83.77
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	83.28	83.01
CDX98868	Canola	endoplasmic reticulum, plasma membrane	83.28	83.01
Bra009137.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	82.95	82.68
CDX70125	Canola	endoplasmic reticulum, plasma membrane	82.95	82.68
GSMUA_Achr9P04310_001	Banana	endoplasmic reticulum, plasma membrane	71.15	82.51
CDY01011	Canola	plasma membrane	83.28	82.47
AT3G11320.1	Thale cress	endoplasmic reticulum, plasma membrane	82.95	82.14
CDY08536	Canola	endoplasmic reticulum, plasma membrane	83.28	81.94
AT5G05820.1	Thale cress	endoplasmic reticulum, plasma membrane	82.95	81.88
KRH46459	Soybean	endoplasmic reticulum, plasma membrane	82.62	81.82
CDY00731	Canola	endoplasmic reticulum, plasma membrane	81.97	81.7
CDX73882	Canola	endoplasmic reticulum, plasma membrane	81.97	81.7
Bra034851.1-P	Field mustard	endoplasmic reticulum, plasma membrane	83.28	81.67
KRG98354	Soybean	endoplasmic reticulum, plasma membrane	81.97	81.17
GSMUA_Achr6P33090_001	Banana	endoplasmic reticulum, plasma membrane	69.18	80.23
GSMUA_Achr5P28400_001	Banana	endoplasmic reticulum, plasma membrane	68.85	79.85
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	81.31	78.73
EER99970	Sorghum	golgi, plasma membrane, plastid	78.69	75.71
Os03t0286300-01	Rice	golgi, plasma membrane, plastid	79.34	75.16
KXG39624	Sorghum	plastid	80.0	75.08
TraesCS4D01G198100.1	Wheat	plastid	78.69	74.53
TraesCS4A01G106700.1	Wheat	plastid	78.69	74.53
TraesCS4B01G197600.1	Wheat	golgi	78.69	74.53
Zm00001d028713_P001	Maize	plasma membrane	78.69	74.07
Zm00001d047754_P001	Maize	plastid	78.69	74.07
HORVU4Hr1G057100.4	Barley	endoplasmic reticulum, plasma membrane, plastid	78.69	73.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	70.16	72.79
Bra001398.1-P	Field mustard	extracellular, golgi, vacuole	36.72	72.73
CDY00919	Canola	extracellular	18.69	69.51
VIT_08s0007g08970.t01	Wine grape	plastid	68.85	66.25
GSMUA_Achr7P22640_001	Banana	mitochondrion	81.97	65.62
VIT_02s0025g04920.t01	Wine grape	peroxisome	66.56	57.67
VIT_18s0001g02970.t01	Wine grape	plasma membrane	33.44	30.0
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	28.52	24.86
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	28.52	24.86
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	25.9	23.44
VIT_07s0005g02280.t01	Wine grape	plasma membrane	28.85	23.16
VIT_05s0020g00740.t01	Wine grape	plasma membrane	28.2	22.45
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.59	14.71

Protein Annotations

EntrezGene:100243342	wikigene:100243342	MapMan:35.1	UniProt:A5B6U6	EMBL:AM448721	ProteinID:CAN72063
ProteinID:CAN72063.1	ProteinID:CBI16019	ProteinID:CBI16019.3	EMBL:FN594951	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100243342	wikigene:LOC100243342	PFAM:PF03151	PANTHER:PTHR44010	PANTHER:PTHR44010:SF5
SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix	UniParc:UPI00015202C5	ArrayExpress:VIT_06s0004g05910	EnsemblPlantsGene:VIT_06s0004g05910
EnsemblPlants:VIT_06s0004g05910.t01	unigene:Vvi.25268	RefSeq:XP_002281102	RefSeq:XP_002281102.1	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:6660357..6663341

Molecular Weight (calculated)

33250.7 Da

IEP (calculated)

10.287

GRAVY (calculated)

0.859

Length

305 amino acids

Sequence
(BLAST)

001: MGSSRWFTIG LITSWYASNI GVLLLNKYLL SNYGFRYPIF LTLCHMLACS LLSYAAIAWL KVVPRQNVRS RAQFVKISVL SLVFCASVVS GNVSLRFLPV
101: SFNQAIGATT PFFTAVFACI MTRRREALLT YFALIPVVAG VIIASGGEPS FHLFGFIICI AATAARALKS VLQGILLSSE GEKLNSMNLL MYMAPVAVAF
201: LLPAALLMEE NVVNITLALA RDDVRILWYL IFNSALAYLV NLTNFLVTKH TSALTLQVLG NAKGAVAVVV SILIFRNPVS ITGMLGYSLT LIGVVLYSEA
301: KKRSK

Best Arabidopsis Sequence Match ( AT3G11320.1 )
(BLAST)

001: MKIAANGRFF TIGLVASWYS SNIGVLLLNK YLLSNYGFKY PIFLTMCHMT ACSLLSYVAI AWMKMVPMQT IRSRVQFLKI AALSLVFCVS VVFGNISLRF
101: LPVSFNQAIG ATTPFFTAVF AYLITFKREA WLTYFTLVPV VTGVVIASGS EPSFHLFGFI MCIAATAARA LKSVLQGILL SSEGEKLNSM NLLLYMAPIA
201: VVFLLPATLI MEKNVVGITI ALARDDFRIV WYLLFNSALA YFVNLTNFLV TKHTSALTLQ VLGNAKGAVA VVVSILIFRN PVSVTGMLGY SLTVCGVILY
301: SEAKKRSK

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At3g11320 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF09]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.