Factsheet for TraesCS4B01G197600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G198100.1	Wheat	plastid	100.0	100.0
TraesCS4A01G106700.1	Wheat	plastid	100.0	100.0
HORVU4Hr1G057100.4	Barley	endoplasmic reticulum, plasma membrane, plastid	100.0	98.47
Os03t0286300-01	Rice	golgi, plasma membrane, plastid	95.03	95.03
Zm00001d028713_P001	Maize	plasma membrane	94.41	93.83
KXG39624	Sorghum	plastid	94.1	93.23
Zm00001d047754_P001	Maize	plastid	93.17	92.59
CDY36312	Canola	endoplasmic reticulum, extracellular	32.61	88.98
Bra001397.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.68	88.51
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	39.75	86.49
CDY01011	Canola	plasma membrane	81.68	85.39
CDX98868	Canola	endoplasmic reticulum, plasma membrane	81.06	85.29
GSMUA_Achr5P28400_001	Banana	endoplasmic reticulum, plasma membrane	69.57	85.17
CDX70125	Canola	endoplasmic reticulum, plasma membrane	80.75	84.97
PGSC0003DMT400069910	Potato	endoplasmic reticulum, plasma membrane	80.75	84.97
CDY08536	Canola	endoplasmic reticulum, plasma membrane	81.68	84.84
GSMUA_Achr6P33090_001	Banana	endoplasmic reticulum, plasma membrane	69.25	84.79
CDX73882	Canola	endoplasmic reticulum, plasma membrane	80.43	84.64
Bra009137.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	80.43	84.64
Bra034851.1-P	Field mustard	endoplasmic reticulum, plasma membrane	81.68	84.57
GSMUA_Achr9P04310_001	Banana	endoplasmic reticulum, plasma membrane	68.94	84.41
CDY11341	Canola	plasma membrane	80.12	84.31
CDY00731	Canola	endoplasmic reticulum, plasma membrane	80.12	84.31
AT3G11320.1	Thale cress	endoplasmic reticulum, plasma membrane	80.43	84.09
CDX80975	Canola	endoplasmic reticulum, plasma membrane	79.81	83.99
AT5G05820.1	Thale cress	endoplasmic reticulum, plasma membrane	80.43	83.82
Bra005868.1-P	Field mustard	endoplasmic reticulum, plasma membrane	80.12	83.77
Solyc05g052790.2.1	Tomato	endoplasmic reticulum, plasma membrane	80.12	83.5
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	74.53	78.69
Bra001398.1-P	Field mustard	extracellular, golgi, vacuole	37.58	78.57
KRG98354	Soybean	endoplasmic reticulum, plasma membrane	74.53	77.92
KRH46459	Soybean	endoplasmic reticulum, plasma membrane	74.22	77.6
CDY00919	Canola	extracellular	19.57	76.83
TraesCS1B01G077000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	67.7	64.88
TraesCS2B01G620900.1	Wheat	plasma membrane	32.3	30.41
TraesCS7B01G225300.2	Wheat	plasma membrane	29.81	28.49
TraesCS5B01G135400.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	27.64	24.12
TraesCS3B01G361600.1	Wheat	golgi	26.4	23.94
TraesCS1B01G322400.1	Wheat	plasma membrane	26.09	23.93
TraesCS4B01G040800.1	Wheat	plasma membrane	26.4	22.19
TraesCS7B01G209100.1	Wheat	plasma membrane	22.67	20.28
TraesCS7B01G007800.2	Wheat	peroxisome	21.43	16.01
TraesCS3B01G324200.2	Wheat	cytosol, peroxisome, plasma membrane	20.81	14.44

Protein Annotations

EnsemblPlants:TraesCS4B01G197600.1	EnsemblPlantsGene:TraesCS4B01G197600	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44010	PANTHER:PTHR44010:SF5	PFAM:PF03151
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4B:-:426111103..426114166

Molecular Weight (calculated)

34543.2 Da

IEP (calculated)

10.069

GRAVY (calculated)

0.801

Length

322 amino acids

Sequence
(BLAST)

001: MTAKGGASPA PGGAGAAANG RFFTVGLVTA WYSSNIGVLL LNKYLLSNYG FKYPIFLTMC HMSACALFSY AAIAWLRIVP MQLVRSRVQL AKISALSLVF
101: CGSVVSGNVS LRYLPVSFNQ AVGATTPFFT AVFAYIMTVK RESWITYLTL VPVVTGVVIA SGGEPSFHLF GFIMCIGATA ARALKTVLQG ILLSSEGEKL
201: NSMNLLLYMA PIAVILLLPA TLFMEDNVVG VTIELAKKDF TIVWLLLFNS CLSYFVNLTN FLVTKHTSAL TLQVLGNAKG AVAVVVSILI FKNPVSVTGM
301: LGYTLTVIGV ILYSESKKRS KP

Best Arabidopsis Sequence Match ( AT3G11320.1 )
(BLAST)

001: MKIAANGRFF TIGLVASWYS SNIGVLLLNK YLLSNYGFKY PIFLTMCHMT ACSLLSYVAI AWMKMVPMQT IRSRVQFLKI AALSLVFCVS VVFGNISLRF
101: LPVSFNQAIG ATTPFFTAVF AYLITFKREA WLTYFTLVPV VTGVVIASGS EPSFHLFGFI MCIAATAARA LKSVLQGILL SSEGEKLNSM NLLLYMAPIA
201: VVFLLPATLI MEKNVVGITI ALARDDFRIV WYLLFNSALA YFVNLTNFLV TKHTSALTLQ VLGNAKGAVA VVVSILIFRN PVSVTGMLGY SLTVCGVILY
301: SEAKKRSK

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At3g11320 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF09]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.