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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, golgi, vacuole

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • golgi 3
  • extracellular 3
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH33048 Soybean extracellular, plasma membrane 61.69 81.2
KRH58008 Soybean mitochondrion, plasma membrane 64.94 57.14
CDX73882 Canola endoplasmic reticulum, plasma membrane 97.4 49.02
CDY00731 Canola endoplasmic reticulum, plasma membrane 96.75 48.69
AT3G11320.1 Thale cress endoplasmic reticulum, plasma membrane 94.16 47.08
Bra034851.1-P Field mustard endoplasmic reticulum, plasma membrane 93.51 46.3
Bra009137.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 90.26 45.42
VIT_13s0019g03270.t01 Wine grape endoplasmic reticulum, plasma membrane 87.66 44.12
KRG97791 Soybean endoplasmic reticulum, plasma membrane 85.71 43.0
PGSC0003DMT400069910 Potato endoplasmic reticulum, plasma membrane 85.06 42.81
KRH15007 Soybean endoplasmic reticulum, plasma membrane 85.06 42.81
Solyc05g052790.2.1 Tomato endoplasmic reticulum, plasma membrane 85.06 42.39
Bra005868.1-P Field mustard endoplasmic reticulum, plasma membrane 83.12 41.56
KRH73122 Soybean endoplasmic reticulum, plasma membrane 82.47 41.5
VIT_08s0007g01690.t01 Wine grape endoplasmic reticulum, plasma membrane 79.22 39.87
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 80.52 39.37
Os03t0286300-01 Rice golgi, plasma membrane, plastid 79.22 37.89
TraesCS4B01G197600.1 Wheat golgi 78.57 37.58
TraesCS4A01G106700.1 Wheat plastid 78.57 37.58
TraesCS4D01G198100.1 Wheat plastid 78.57 37.58
Zm00001d047754_P001 Maize plastid 78.57 37.35
KXG39624 Sorghum plastid 78.57 37.23
Zm00001d028713_P001 Maize plasma membrane 77.92 37.04
HORVU4Hr1G057100.4 Barley endoplasmic reticulum, plasma membrane, plastid 78.57 37.0
EER99970 Sorghum golgi, plasma membrane, plastid 75.97 36.91
VIT_06s0004g05910.t01 Wine grape endoplasmic reticulum, plasma membrane 72.73 36.72
GSMUA_Achr6P33090_001 Banana endoplasmic reticulum, plasma membrane 59.09 34.6
GSMUA_Achr5P28400_001 Banana endoplasmic reticulum, plasma membrane 58.44 34.22
GSMUA_Achr9P04310_001 Banana endoplasmic reticulum, plasma membrane 57.79 33.84
Bra009481.1-P Field mustard endoplasmic reticulum, plasma membrane 67.53 33.44
GSMUA_Achr7P22640_001 Banana mitochondrion 79.87 32.28
KRH31077 Soybean plastid 85.06 32.11
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 55.84 29.25
Bra005796.1-P Field mustard endoplasmic reticulum, plasma membrane 50.65 27.86
Bra016769.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome, plastid 59.74 25.48
Bra019771.1-P Field mustard plastid 59.09 25.21
Bra034102.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 64.29 17.4
Bra003677.1-P Field mustard plasma membrane 29.87 13.69
Bra015662.1-P Field mustard plasma membrane 29.87 13.65
Bra016403.1-P Field mustard plasma membrane 29.87 13.41
Bra007795.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.62 11.75
Bra006092.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.62 11.71
Bra020498.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.97 11.56
Bra009838.1-P Field mustard golgi, plasma membrane, vacuole 25.97 11.56
Bra008981.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.97 11.43
Bra011343.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.97 11.4
Bra034256.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.32 11.3
Bra021246.1-P Field mustard plasma membrane 26.62 11.02
Bra018714.1-P Field mustard plasma membrane 25.97 10.84
Bra014116.1-P Field mustard plasma membrane 25.32 10.57
Bra027340.1-P Field mustard plasma membrane 21.43 9.51
Bra022215.1-P Field mustard cytosol, extracellular, plasma membrane 22.08 8.59
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 20.13 7.75
Bra030654.1-P Field mustard plasma membrane 20.78 7.57
Bra021553.1-P Field mustard extracellular, plasma membrane, vacuole 12.34 6.67
Bra014117.1-P Field mustard plasma membrane 4.55 2.51
Bra001397.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 1.95 2.03
Protein Annotations
EnsemblPlants:Bra001398.1EnsemblPlants:Bra001398.1-PEnsemblPlantsGene:Bra001398GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domPANTHER:PTHR44010PANTHER:PTHR44010:SF5PFAM:PF03151SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0002540713UniProt:M4CB19MapMan:35.1::
Description
AT3G11320 (E=5e-071) | organic anion transmembrane transporter
Coordinates
chrA03:-:16181375..16181950
Molecular Weight (calculated)
17077.5 Da
IEP (calculated)
10.164
GRAVY (calculated)
0.908
Length
154 amino acids
Sequence
(BLAST)
001: MKMAANGRFF TIGIVASWYS SNIGVLLLNK YLLSNYGFKY PIFLTMCHMT ACSLLSYVAI AWMKMVPMQT IRSRVQFLKI AALSLVFCVS VVFGNISLRF
101: LPVSFNQAIG ATTPFFTAVF AYLITLKKEA WLTYVTLVPV VTGVVIASGE SWVG
Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [plasma membrane,endoplasmic reticulum,peroxisome,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.