CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010985_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	88.06	87.02
TraesCS1A01G058700.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	78.51	79.7
TraesCS1D01G059800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	78.21	79.39
HORVU1Hr1G011890.1	Barley	endoplasmic reticulum, peroxisome, plasma membrane	77.91	78.61
TraesCS1B01G077000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	78.51	78.27
Os05t0121900-00	Rice	endoplasmic reticulum, plasma membrane, plastid	75.82	74.71
EER99970	Sorghum	golgi, plasma membrane, plastid	63.28	66.88
KXG39624	Sorghum	plastid	62.39	64.31
EES13163	Sorghum	plasma membrane	29.25	28.32
EES13196	Sorghum	plasma membrane	27.16	26.53
KXG33567	Sorghum	cytosol, golgi, plasma membrane	26.87	24.93
KXG22255	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	25.97	24.37
EES16534	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	27.46	23.96
EER93603	Sorghum	plasma membrane	24.48	21.69
EES14504	Sorghum	golgi, peroxisome, plasma membrane	20.9	19.28
KXG19328	Sorghum	peroxisome	21.19	16.32
KXG33369	Sorghum	cytosol, peroxisome, plasma membrane	22.09	15.81

Protein Annotations

EnsemblPlants:EES18936	EnsemblPlantsGene:SORBI_3009G025100	EntrezGene:8071246	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44010	PANTHER:PTHR44010:SF3	PFAM:PF03151	ProteinID:EES18936	ProteinID:EES18936.1
RefSeq:XP_002440506.1	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001A88AF5	UniProt:C5YZ26
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:2237460..2239594

Molecular Weight (calculated)

35564.6 Da

IEP (calculated)

9.739

GRAVY (calculated)

0.598

Length

335 amino acids

Sequence
(BLAST)

001: MGQQEAQTHH PDEAALPTTT AAAASSSSSS SRLFTAWLVA SWYASNIGVL LLNKYLLSVY GFRFPILLTA CHMTACTLLS ALVHHHHHHR SSSRSRGSRS
101: RAQLARVAVL GAVFCASVVA GNVSLRHLPV SFNQAVGATT PFFTALLAYA VAGRREAFAT YAALVPVVAG VVIATGGEPS FHLFGFIMCV AATAGRALKS
201: VLQGILLSSE EEKMDSMDLL RYMAPVAVLL LVPATLAMER DAFGVVADLA RVDPSFLWIL LCNSCLAYFV NLTNFLVTKH TSALTLQVLG NAKGAVAVVV
301: SILIFRNPVT VVGMLGYGVT VAGVVLYGEA KKRSK

Best Arabidopsis Sequence Match ( AT3G11320.1 )
(BLAST)

001: MKIAANGRFF TIGLVASWYS SNIGVLLLNK YLLSNYGFKY PIFLTMCHMT ACSLLSYVAI AWMKMVPMQT IRSRVQFLKI AALSLVFCVS VVFGNISLRF
101: LPVSFNQAIG ATTPFFTAVF AYLITFKREA WLTYFTLVPV VTGVVIASGS EPSFHLFGFI MCIAATAARA LKSVLQGILL SSEGEKLNSM NLLLYMAPIA
201: VVFLLPATLI MEKNVVGITI ALARDDFRIV WYLLFNSALA YFVNLTNFLV TKHTSALTLQ VLGNAKGAVA VVVSILIFRN PVSVTGMLGY SLTVCGVILY
301: SEAKKRSK

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At3g11320 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF09]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.