Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66383 | Canola | plasma membrane | 54.61 | 61.07 |
| Bra014117.1-P | Field mustard | plasma membrane | 56.66 | 59.5 |
| CDY41850 | Canola | plasma membrane | 56.31 | 59.14 |
| KRH02464 | Soybean | endoplasmic reticulum, plasma membrane | 70.99 | 58.76 |
| KRH19508 | Soybean | plasma membrane | 72.7 | 55.91 |
| CDY43289 | Canola | plasma membrane | 69.28 | 55.77 |
| Bra021246.1-P | Field mustard | plasma membrane | 70.65 | 55.65 |
| CDY63022 | Canola | plasma membrane | 70.65 | 55.65 |
| CDY48700 | Canola | plasma membrane | 70.31 | 55.38 |
| Bra018714.1-P | Field mustard | plasma membrane | 69.28 | 55.01 |
| CDX93651 | Canola | plasma membrane | 69.28 | 55.01 |
| KRH12712 | Soybean | endoplasmic reticulum | 72.01 | 54.95 |
| AT3G17430.2 | Thale cress | plasma membrane | 70.31 | 54.93 |
| AT1G48230.1 | Thale cress | plasma membrane | 68.6 | 54.77 |
| KRH37626 | Soybean | mitochondrion, plasma membrane | 71.67 | 54.69 |
| VIT_05s0020g00740.t01 | Wine grape | plasma membrane | 71.33 | 54.57 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 69.62 | 54.55 |
| Bra014116.1-P | Field mustard | plasma membrane | 68.26 | 54.2 |
| CDX77330 | Canola | plasma membrane | 68.26 | 54.2 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 68.94 | 54.16 |
| CDY41853 | Canola | plasma membrane | 67.92 | 53.93 |
| HORVU4Hr1G006510.1 | Barley | plastid | 66.21 | 43.11 |
| CDX92132 | Canola | plasma membrane | 45.05 | 42.58 |
| HORVU4Hr1G034790.1 | Barley | plasma membrane | 21.84 | 28.57 |
| Bra022215.1-P | Field mustard | cytosol, extracellular, plasma membrane | 37.88 | 28.03 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 35.49 | 27.23 |
| HORVU7Hr1G073550.1 | Barley | plastid | 36.52 | 26.42 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 36.86 | 26.15 |
| HORVU5Hr1G016290.1 | Barley | plasma membrane | 21.84 | 25.4 |
| HORVU6Hr1G084900.3 | Barley | plasma membrane | 21.16 | 24.22 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 35.84 | 23.6 |
| HORVU2Hr1G126950.1 | Barley | plasma membrane | 23.89 | 20.41 |
| HORVU2Hr1G127060.1 | Barley | plasma membrane | 23.89 | 20.41 |
| HORVU4Hr1G057100.4 | Barley | endoplasmic reticulum, plasma membrane, plastid | 22.53 | 20.18 |
| HORVU1Hr1G011890.1 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 21.5 | 18.98 |
| HORVU7Hr1G077640.13 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 22.87 | 18.66 |
| HORVU3Hr1G095930.3 | Barley | mitochondrion | 18.77 | 16.32 |
| HORVU6Hr1G047820.1 | Barley | mitochondrion | 10.92 | 14.61 |
| HORVU2Hr1G117120.7 | Barley | extracellular, plasma membrane | 7.51 | 12.43 |
| HORVU3Hr1G071660.6 | Barley | cytosol, peroxisome, plasma membrane | 18.77 | 11.85 |
| HORVU7Hr1G022910.1 | Barley | plastid | 17.06 | 10.44 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G019670.3 | EnsemblPlantsGene:HORVU5Hr1G019670 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sugar_P_trans_dom |
| ncoils:Coil | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF170 | PFAM:PF03151 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B488446 | UniProt:A0A287QJP6 | MapMan:24.2.1.1.10 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:86783335..86785123
Molecular Weight (calculated)
28999.2 Da
IEP (calculated)
9.322
GRAVY (calculated)
0.643
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFCSKAFLN DSLIDSIFPV FNFFFIEKKF GNTAYLHISV AFIQMLKALM PVATFMMAVM CGTDKPRCDV FLNMVLVSVG VVISSYGEIH FNVVGTGYQV
101: TGIFAEALRL VLTQVLLQKK GLSLNPITSL YYIAPCSFMF LFVPWYLLEK PGMQVSQDQF NFWIFFSNAL XALALNFSIF LVIGRTGAVT IRVAGVLKDW
201: ILIALSTVIF PESTITGLNI IGYAIALCGV VMYNYIKVKD VRXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXPRVSS RIASYLRKHH NGD
101: TGIFAEALRL VLTQVLLQKK GLSLNPITSL YYIAPCSFMF LFVPWYLLEK PGMQVSQDQF NFWIFFSNAL XALALNFSIF LVIGRTGAVT IRVAGVLKDW
201: ILIALSTVIF PESTITGLNI IGYAIALCGV VMYNYIKVKD VRXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXPRVSS RIASYLRKHH NGD
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
Arabidopsis Description
UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.