Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G091830.4 | |
| HORVU6Hr1G060760.3 | |
| HORVU7Hr1G071270.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G77610.1 | HORVU2Hr1G091830.4 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | HORVU6Hr1G060760.3 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | HORVU7Hr1G071270.2 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G084900.3 | Barley | plasma membrane | 48.96 | 64.45 |
| TraesCS2B01G620900.1 | Wheat | plasma membrane | 63.2 | 62.28 |
| TraesCS2A01G559300.1 | Wheat | plasma membrane | 62.91 | 61.99 |
| HORVU5Hr1G016290.1 | Barley | plasma membrane | 46.29 | 61.9 |
| HORVU2Hr1G126950.1 | Barley | plasma membrane | 62.91 | 61.81 |
| HORVU2Hr1G127060.1 | Barley | plasma membrane | 62.91 | 61.81 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 62.61 | 61.7 |
| HORVU4Hr1G034790.1 | Barley | plasma membrane | 40.36 | 60.71 |
| EES13163 | Sorghum | plasma membrane | 58.46 | 56.94 |
| Zm00001d002941_P001 | Maize | plasma membrane | 56.97 | 55.81 |
| Os04t0692000-02 | Rice | plasma membrane | 57.57 | 55.43 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 29.97 | 52.88 |
| VIT_18s0001g02970.t01 | Wine grape | plasma membrane | 52.52 | 52.06 |
| CDX79213 | Canola | plasma membrane | 50.45 | 50.6 |
| Bra003677.1-P | Field mustard | plasma membrane | 50.45 | 50.6 |
| CDX88379 | Canola | plasma membrane | 50.45 | 50.45 |
| AT1G77610.1 | Thale cress | plasma membrane | 50.15 | 50.3 |
| Bra015662.1-P | Field mustard | plasma membrane | 50.15 | 50.15 |
| CDX87511 | Canola | plasma membrane | 50.15 | 50.15 |
| CDX68051 | Canola | plasma membrane | 49.85 | 50.0 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 50.45 | 49.85 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 50.45 | 49.85 |
| CDY38825 | Canola | plasma membrane | 50.45 | 49.71 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 50.15 | 49.71 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 49.85 | 49.41 |
| KRH64681 | Soybean | plasma membrane | 50.45 | 49.28 |
| HORVU2Hr1G117120.7 | Barley | extracellular, plasma membrane | 25.82 | 49.15 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 24.93 | 49.12 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 24.93 | 49.12 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 24.93 | 49.12 |
| KRH18757 | Soybean | plasma membrane | 49.85 | 49.12 |
| KRH16322 | Soybean | plasma membrane | 49.85 | 49.12 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 24.93 | 49.12 |
| CDX96572 | Canola | plasma membrane | 49.55 | 48.83 |
| KRH53233 | Soybean | plasma membrane | 49.85 | 48.7 |
| Bra016403.1-P | Field mustard | plasma membrane | 49.55 | 48.69 |
| HORVU7Hr1G077640.13 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 51.63 | 48.47 |
| AT1G21870.1 | Thale cress | plasma membrane | 48.66 | 48.09 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 46.59 | 46.59 |
| HORVU6Hr1G047820.1 | Barley | mitochondrion | 27.0 | 41.55 |
| HORVU4Hr1G057100.4 | Barley | endoplasmic reticulum, plasma membrane, plastid | 21.66 | 22.32 |
| CDX79220 | Canola | mitochondrion | 31.16 | 21.65 |
| HORVU1Hr1G011890.1 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 18.99 | 19.28 |
| HORVU5Hr1G019670.3 | Barley | plasma membrane | 16.32 | 18.77 |
| HORVU4Hr1G006510.1 | Barley | plastid | 18.99 | 14.22 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 14.54 | 12.83 |
| HORVU7Hr1G073550.1 | Barley | plastid | 15.13 | 12.59 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 15.43 | 12.59 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 15.13 | 11.46 |
| HORVU3Hr1G071660.6 | Barley | cytosol, peroxisome, plasma membrane | 13.95 | 10.13 |
| HORVU7Hr1G022910.1 | Barley | plastid | 14.24 | 10.02 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G095930.3 | EnsemblPlantsGene:HORVU3Hr1G095930 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sugar_P_trans_dom |
| PANTHER:PTHR44674 | PANTHER:PTHR44674:SF2 | PFAM:PF03151 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI000B468D9D | UniProt:A0A287ME81 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:651474450..651477331
Molecular Weight (calculated)
37310.3 Da
IEP (calculated)
10.639
GRAVY (calculated)
0.184
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: PPAAAVPLLR YQDRSHRARL VQLVRRGKGK GRFLARLRLR DGVCRRLRRA GQHARGARHP PVVGLPRHRH HQQQVDLPAE VGFQVPPDGV LHPLHMPIGA
101: YVAIHVLKAK PLIQVEPEDR WKRIFPMSFV FCMNIVLGNV SLRYIPVSFM QTMKSFTPAT TVYYMAPFAT MILALPAMLL EGGGVIDWFY THDSVFPSLI
201: IILGSGVLAF CLNFSIFYVI HSTTAVTFNV AGNLKVAVAV LVSWLIFRNP ISPMNAIGCT ITLVGCTFCG YVRHLISQQK AAAPLGSQGT NSPRSRVEML
301: PLVGDKEDKE LHPCLQNGRR AIIGVIDLTT DSSEKGL
101: YVAIHVLKAK PLIQVEPEDR WKRIFPMSFV FCMNIVLGNV SLRYIPVSFM QTMKSFTPAT TVYYMAPFAT MILALPAMLL EGGGVIDWFY THDSVFPSLI
201: IILGSGVLAF CLNFSIFYVI HSTTAVTFNV AGNLKVAVAV LVSWLIFRNP ISPMNAIGCT ITLVGCTFCG YVRHLISQQK AAAPLGSQGT NSPRSRVEML
301: PLVGDKEDKE LHPCLQNGRR AIIGVIDLTT DSSEKGL
001: MEEGSLWRQW TMFRSLLSIL QWWGFNVTVI IMNKWIFQKL DFKFPLSVSC VHFICSSIGA YIVIKVLKLK PLIVVDPEDR WRRIFPMSFV FCINIVLGNI
101: SLRYIPVSFM QTIKSLTPAT TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSFNV FGFCAALFGC LATSTKTILA ESLLHGYKFD SINTVYYMAP
201: FATMILGLPA FLLERNGILD WFEAHPSPWS ALIILFNSGV LAFCLNFSIF YVIQSTTAVT FNVAGNLKVA VAVFVSWMIF RNPISPMNAV GCGITLVGCT
301: FYGYVRHMLS QQQPGTPRTP RTPRNKMELI PLVNDKLESK I
101: SLRYIPVSFM QTIKSLTPAT TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSFNV FGFCAALFGC LATSTKTILA ESLLHGYKFD SINTVYYMAP
201: FATMILGLPA FLLERNGILD WFEAHPSPWS ALIILFNSGV LAFCLNFSIF YVIQSTTAVT FNVAGNLKVA VAVFVSWMIF RNPISPMNAV GCGITLVGCT
301: FYGYVRHMLS QQQPGTPRTP RTPRNKMELI PLVNDKLESK I
Arabidopsis Description
GONST5GDP-mannose transporter GONST5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFE9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.