Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 4
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0643000-01
Os04t0534400-01
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77610.1 Os02t0643000-01 AT3G60600.1 21798944
AT1G77610.1 Os04t0534400-01 AT3G60600.1 21798944
AT1G77610.1 Os08t0156700-01 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G571200.1 Wheat plasma membrane 89.71 91.81
TraesCS2B01G620900.1 Wheat plasma membrane 89.71 91.81
HORVU2Hr1G127060.1 Barley plasma membrane 89.71 91.55
HORVU2Hr1G126950.1 Barley plasma membrane 89.71 91.55
TraesCS2A01G559300.1 Wheat plasma membrane 89.43 91.52
EES13163 Sorghum plasma membrane 89.14 90.17
Zm00001d002941_P001 Maize plasma membrane 88.0 89.53
HORVU5Hr1G016290.1 Barley plasma membrane 63.14 87.7
HORVU4Hr1G034790.1 Barley plasma membrane 56.0 87.5
HORVU6Hr1G084900.3 Barley plasma membrane 63.43 86.72
Os08t0104900-01 Rice plasma membrane 82.57 85.76
CDX87511 Canola plasma membrane 81.14 84.27
Bra003677.1-P Field mustard plasma membrane 80.86 84.23
Bra015662.1-P Field mustard plasma membrane 80.86 83.98
CDX88379 Canola plasma membrane 80.86 83.98
AT1G77610.1 Thale cress plasma membrane 80.57 83.93
CDX79213 Canola plasma membrane 80.57 83.93
CDX68051 Canola plasma membrane 80.0 83.33
GSMUA_Achr3P22140_001 Banana plasma membrane 80.0 82.11
VIT_18s0001g02970.t01 Wine grape plasma membrane 79.71 82.06
PGSC0003DMT400045308 Potato plasma membrane 79.43 81.76
CDX96572 Canola plasma membrane 79.71 81.58
CDY38825 Canola plasma membrane 79.71 81.58
Solyc06g060370.2.1 Tomato plasma membrane 79.14 81.47
Bra016403.1-P Field mustard plasma membrane 79.71 81.34
GSMUA_Achr6P18770_001 Banana plasma membrane 78.86 80.94
KRH16322 Soybean plasma membrane 78.86 80.7
AT1G21870.1 Thale cress plasma membrane 78.57 80.65
KRH18757 Soybean plasma membrane 78.57 80.41
KRH53233 Soybean plasma membrane 79.14 80.29
KRH64681 Soybean plasma membrane 78.86 80.0
HORVU6Hr1G047820.1 Barley mitochondrion 47.43 75.8
Solyc11g012880.1.1 Tomato plasma membrane 72.57 75.37
CDY63382 Canola peroxisome, plasma membrane, plastid 33.71 69.01
CDY70208 Canola peroxisome, plasma membrane, plastid 33.71 69.01
CDY38193 Canola peroxisome, plasma membrane, plastid 33.71 69.01
CDY25067 Canola peroxisome, plasma membrane, plastid 33.71 69.01
HORVU2Hr1G117120.7 Barley extracellular, plasma membrane 33.71 66.67
HORVU3Hr1G095930.3 Barley mitochondrion 55.43 57.57
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 26.86 49.21
CDX79220 Canola mitochondrion 46.0 33.2
Os03t0286300-01 Rice golgi, plasma membrane, plastid 29.71 32.3
Os05t0121900-00 Rice endoplasmic reticulum, plasma membrane, plastid 28.29 29.12
Os03t0702700-02 Rice plasma membrane 16.29 22.62
Os08t0135100-01 Rice peroxisome, plasma membrane, vacuole 20.86 20.86
Os05t0494500-01 Rice plasma membrane 19.71 19.49
Os01t0802850-00 Rice cytosol, golgi, plasma membrane 19.71 19.11
Os11t0139400-01 Rice plastid 20.29 18.3
Os12t0136100-00 Rice peroxisome 20.29 16.59
Os06t0153200-02 Rice peroxisome 17.43 14.15
Os01t0749900-01 Rice cytosol 18.86 14.01
Os03t0622700-00 Rice mitochondrion 14.86 10.99
Protein Annotations
MapMan:24.2.1.1.2EntrezGene:4337510EMBL:AK103611ProteinID:BAF16278.1ProteinID:BAS91792.1ProteinID:CAE05781.2
ProteinID:EAZ32524.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:Os04g0692000EnsemblPlants:Os04t0692000-02
PFAM:PF03151PANTHER:PTHR44674PANTHER:PTHR44674:SF2UniProt:Q7XKA0SUPFAM:SSF103481InterPro:Sugar_P_trans_dom
TMHMM:TMhelixUniParc:UPI00001B1E10RefSeq:XP_015636289.1SEG:seg::
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os04t0692000-02)
Coordinates
chr4:-:35418974..35421543
Molecular Weight (calculated)
38489.7 Da
IEP (calculated)
8.892
GRAVY (calculated)
0.661
Length
350 amino acids
Sequence
(BLAST)
001: MEQGGEAGTG GGLGNLRALL AILQWWGFNV TVIIINKWIF QKLDFKFPLT VSCVHFICSS IGAYIAIHVL KAKPLIQVEP EDRWRRIFPM SFVFCINIVL
101: GNVSLRYIPV SFMQTIKSFT PATTVILQWL VWSKHFEWRI WASLVPIVGG ILLTSITELS FNMFGFCAAM VGCLATSTKT ILAESLLHGY KFDSINTVYY
201: MAPFATMILA LPAVLLEGGG VVTWFYTHDS IASALVIIIG SGVLAFCLNF SIFYVIHSTT AVTFNVAGNL KVAVAVLVSW LIFRNPISPM NAIGCAITLV
301: GCTFYGYVRH LIPQQQAVAP GTGSPTTSQT NSPRSRMEML PLVGDKQEKV
Best Arabidopsis Sequence Match ( AT1G77610.1 )
(BLAST)
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.