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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • golgi 4
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70995
CDX88803
CDX92368
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G01430.1 CDX70995 AT5G22290.1 21798944
AT4G01430.1 CDX88803 AT5G22290.1 21798944
AT4G01430.1 CDX92368 AT5G22290.1 21798944
AT4G01430.1 CDY09128 AT5G22290.1 21798944
AT4G01430.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 100.0 100.0
CDY70787 Canola golgi, plasma membrane 91.61 98.43
AT4G01430.1 Thale cress plasma membrane 81.02 60.82
CDY70635 Canola plasma membrane 54.74 59.52
CDX90005 Canola plasma membrane 69.71 52.62
CDY15204 Canola plasma membrane 69.34 52.34
CDY55329 Canola plasma membrane 66.42 50.42
CDY01937 Canola extracellular, plasma membrane, vacuole 22.99 50.4
CDY32447 Canola plasma membrane 52.19 47.67
CDY32446 Canola plasma membrane 56.57 42.12
CDY37472 Canola cytosol, golgi, plasma membrane 56.57 42.12
CDY00079 Canola extracellular 12.77 41.67
CDY69734 Canola plasma membrane 43.43 39.67
KRH04198 Soybean extracellular, plasma membrane, vacuole 32.85 35.86
CDX97249 Canola plasma membrane 47.08 35.64
CDY01936 Canola plasma membrane 46.72 35.36
CDY51711 Canola plasma membrane 46.72 35.26
CDY07144 Canola plasma membrane 46.72 35.16
CDX97247 Canola plasma membrane 45.62 34.63
CDX83041 Canola plasma membrane 40.15 34.16
CDX74381 Canola plasma membrane 45.26 34.07
CDX91849 Canola plasma membrane 44.53 33.7
CDX68485 Canola plasma membrane 38.69 33.02
CDX74385 Canola plasma membrane 43.43 32.87
VIT_01s0010g03450.t01 Wine grape plasma membrane 39.78 30.11
CDX91847 Canola plasma membrane 39.05 29.97
CDX91850 Canola plasma membrane 32.48 29.97
CDY60103 Canola plasma membrane 11.68 29.63
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 37.23 29.39
Solyc04g007590.1.1 Tomato nucleus 36.86 29.11
VIT_01s0010g03480.t01 Wine grape plasma membrane 38.32 29.01
KRG90631 Soybean plasma membrane 36.5 28.9
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 33.94 28.7
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 28.47 28.68
CDY45904 Canola plasma membrane 37.96 28.65
CDY35779 Canola plasma membrane 37.59 28.37
PGSC0003DMT400015286 Potato plasma membrane 37.96 28.26
CDY66443 Canola plasma membrane 36.13 27.27
KRG89109 Soybean plasma membrane 37.96 27.15
KRH40897 Soybean plasma membrane 37.96 27.15
TraesCS1B01G041700.1 Wheat plasma membrane 31.39 26.96
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 33.94 26.05
Zm00001d054085_P001 Maize plasma membrane 32.85 26.01
TraesCS5D01G021800.1 Wheat plasma membrane 31.39 25.9
TraesCS6A01G008700.1 Wheat plasma membrane 32.85 25.71
TraesCS6D01G009900.2 Wheat plasma membrane 32.85 25.71
TraesCS6B01G015400.1 Wheat plasma membrane 32.48 25.65
EER87705 Sorghum plasma membrane 34.31 25.61
HORVU6Hr1G000500.17 Barley plasma membrane 33.58 25.56
TraesCS4D01G164600.1 Wheat plasma membrane 25.55 25.55
GSMUA_Achr1P06340_001 Banana extracellular, golgi 32.85 25.5
TraesCS5A01G015800.1 Wheat plasma membrane 30.66 25.45
TraesCS6A01G008800.2 Wheat plasma membrane 32.48 25.36
TraesCS6D01G009800.1 Wheat plasma membrane 32.48 25.28
TraesCS6D01G044200.1 Wheat plasma membrane 30.29 25.15
Os06t0107600-01 Rice plasma membrane 33.21 25.07
Os06t0109300-01 Rice golgi, plasma membrane 32.85 25.0
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 23.72 24.9
OQU75691 Sorghum plasma membrane 31.75 24.58
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 31.39 24.57
Os04t0422300-01 Rice plasma membrane 33.21 24.33
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 31.02 24.29
OQU84142 Sorghum plasma membrane 33.21 24.27
TraesCS4B01G086600.1 Wheat plasma membrane 31.39 24.23
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 31.02 24.15
TraesCS5B01G014100.1 Wheat plasma membrane 30.66 24.14
EES04319 Sorghum extracellular, golgi, plasma membrane 31.75 23.97
TraesCS7D01G022800.1 Wheat plasma membrane 31.75 23.77
TraesCS4A01G464100.1 Wheat plasma membrane 32.12 23.72
Zm00001d054081_P001 Maize plasma membrane 30.29 23.71
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 32.48 23.61
TraesCS7A01G024900.1 Wheat plasma membrane 31.39 23.43
TraesCS7A01G020400.1 Wheat plasma membrane 31.39 23.18
Zm00001d045576_P001 Maize plasma membrane 33.58 23.17
TraesCS6A01G009400.1 Wheat plasma membrane 29.93 23.16
TraesCS6B01G014700.1 Wheat plasma membrane 29.93 23.16
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 30.66 23.14
HORVU7Hr1G002200.2 Barley plasma membrane 31.02 23.1
HORVU6Hr1G000600.1 Barley plasma membrane 29.93 23.03
TraesCS7D01G082900.1 Wheat plasma membrane 29.93 22.97
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 31.02 22.91
TraesCS6D01G012400.1 Wheat plasma membrane 29.56 22.88
TraesCS6B01G015700.1 Wheat plasma membrane 29.56 22.82
HORVU7Hr1G019700.4 Barley plasma membrane 29.56 22.69
TraesCS4A01G472400.1 Wheat plasma membrane 31.02 22.55
CDY64772 Canola plasma membrane 23.72 21.45
CDY42121 Canola plasma membrane 26.28 20.93
TraesCS7A01G087800.1 Wheat plasma membrane 30.66 20.84
CDY64689 Canola plasma membrane 26.28 20.81
CDY06357 Canola plasma membrane 22.26 20.61
TraesCS4A01G386700.1 Wheat plasma membrane 30.29 20.54
TraesCS6A01G038300.1 Wheat plasma membrane 17.88 20.25
CDY62464 Canola plasma membrane 27.01 20.05
CDX94974 Canola plasma membrane 28.1 20.0
CDX94976 Canola plasma membrane 28.1 20.0
CDY69907 Canola plasma membrane 28.1 20.0
CDY59354 Canola plasma membrane 27.01 19.37
CDX81497 Canola plasma membrane 26.64 19.16
CDY12698 Canola plasma membrane 26.28 18.95
CDY24356 Canola plasma membrane 24.09 18.18
Os06t0109200-01 Rice plasma membrane 22.99 17.6
HORVU5Hr1G067230.40 Barley mitochondrion 31.75 17.23
CDX86350 Canola plasma membrane 36.13 16.31
GSMUA_Achr7P17540_001 Banana plasma membrane 33.58 16.11
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 9.85 15.17
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 9.85 15.17
CDY62465 Canola extracellular, plasma membrane, vacuole 13.14 14.75
HORVU5Hr1G002470.1 Barley golgi 10.58 11.65
Zm00001d045567_P001 Maize plasma membrane 31.39 11.2
CDY64463 Canola plasma membrane 2.19 4.72
CDX97245 Canola plastid 1.46 3.57
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5GO:A0A078E928EnsemblPlants:CDX97244ProteinID:CDX97244ProteinID:CDX97244.1InterPro:EamA_dom
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857EnsemblPlantsGene:GSBRNA2T00104254001PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF10
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002547016InterPro:WAT1-related::
Description
BnaA02g20350D
Coordinates
chrLK031898:+:61520..64644
Molecular Weight (calculated)
30963.9 Da
IEP (calculated)
9.273
GRAVY (calculated)
0.596
Length
274 amino acids
Sequence
(BLAST)
001: MKEEQWAPVI VMLISSVAMG SVNALVKKAL DVGVNHMIFA AYRMSISALI LVPFSYIWER KTRPMLTFML LCEHFISGLL GASLMQFFFL LGLSYTSPTV
101: AMALNSMLPA ITFALALFFR IENAQKLKSR AGVLKLIGTL ICILGAMFLT FYKGLQVSNP HTHPEAIDNI TLHNNGHDQA KKWLLGCVYL FTGIVLLSLW
201: MLFQGKLSVK YPCTKYSSTC LMSVFAAFQC AILSLYKSRE VEDWIIKDKL VIFVILYASY MQYIKLALSR DEEY
Best Arabidopsis Sequence Match ( AT4G01430.2 )
(BLAST)
001: MMKEEQWAPV IVMLISSVAM GSVNALVKKA LDVGVNHMIF GAYRMAISAL ILVPFSYIWE RKTRPQLTFM LLCEHFISGL LGASLMQFFF LLGLSYTSAT
101: VSMALVSMLP AITFALALIF RIENAQNLKS KAGVLKVMGT LICIMGAMLL TFYKGPELSN PHSHPQARHN NNNNNGHDQT KKWLLGCLYL VIGTVLLSLW
201: MLFQGKLSFK YPGNKYSSTC LMSVFASFQC AILSLYKSRD VKDWIIEDKF VILVTLYAGI VGQAMSTVVT SWSIKMTGAV FVSTFSPVSL VAATLFDFLI
301: LHSPLYLGRF HSQINSI
Arabidopsis Description
WAT1-related protein At4g01430 [Source:UniProtKB/Swiss-Prot;Acc:Q9M131]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.