Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 82.78 83.47
TraesCS7A01G024900.1 Wheat plasma membrane 75.0 73.57
TraesCS7D01G022800.1 Wheat plasma membrane 74.72 73.5
TraesCS4A01G464100.1 Wheat plasma membrane 73.33 71.16
HORVU5Hr1G067230.40 Barley mitochondrion 74.44 53.07
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 51.94 49.6
Os06t0107600-01 Rice plasma membrane 46.39 46.01
Os04t0422300-01 Rice plasma membrane 46.39 44.65
Solyc12g099580.1.1 Tomato plasma membrane 42.5 42.5
PGSC0003DMT400011804 Potato plasma membrane 42.22 42.22
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 43.06 42.12
VIT_01s0010g03480.t01 Wine grape plasma membrane 42.22 41.99
VIT_01s0010g03450.t01 Wine grape plasma membrane 42.22 41.99
KRH58997 Soybean plasma membrane 41.11 41.46
PGSC0003DMT400029440 Potato plasma membrane 26.94 40.76
Solyc04g007590.1.1 Tomato nucleus 38.61 40.06
KRG90631 Soybean plasma membrane 38.33 39.88
CDY60103 Canola plasma membrane 11.94 39.81
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.33 39.77
KRH11051 Soybean plasma membrane 40.83 39.3
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 22.5 38.76
Solyc01g066850.2.1 Tomato plasma membrane 41.94 38.32
KRH40897 Soybean plasma membrane 40.56 38.12
CDY69734 Canola plasma membrane 31.39 37.67
CDY35779 Canola plasma membrane 37.78 37.47
CDY45904 Canola plasma membrane 37.78 37.47
CDY66443 Canola plasma membrane 37.5 37.19
KRG89109 Soybean plasma membrane 39.44 37.08
CDX83041 Canola plasma membrane 33.06 36.96
KRH42891 Soybean plasma membrane 40.28 36.8
CDX68485 Canola plasma membrane 32.78 36.76
CDY51711 Canola plasma membrane 36.94 36.64
Bra037413.1-P Field mustard plasma membrane 36.94 36.64
Bra000926.1-P Field mustard plasma membrane 32.78 36.09
KRH04198 Soybean extracellular, plasma membrane, vacuole 25.0 35.86
CDY07144 Canola plasma membrane 36.11 35.71
AT4G01440.1 Thale cress plasma membrane 36.11 35.62
Bra029909.1-P Field mustard plasma membrane 25.0 35.57
Bra008548.1-P Field mustard extracellular, plasma membrane 34.44 35.53
AT3G30340.1 Thale cress plasma membrane 35.83 35.44
CDX97249 Canola plasma membrane 35.56 35.36
Bra033290.1-P Field mustard plasma membrane 34.72 35.21
CDY01936 Canola plasma membrane 35.28 35.08
Bra032617.1-P Field mustard plasma membrane 35.0 34.9
Bra000923.1-P Field mustard plasma membrane 34.72 34.82
CDX91849 Canola plasma membrane 35.0 34.81
CDX74385 Canola plasma membrane 35.0 34.81
CDY32447 Canola plasma membrane 28.89 34.67
CDY55329 Canola plasma membrane 34.72 34.63
AT4G01450.2 Thale cress plasma membrane 34.72 34.63
CDX74381 Canola plasma membrane 35.0 34.62
PGSC0003DMT400015286 Potato plasma membrane 35.28 34.51
CDX90005 Canola plasma membrane 34.72 34.44
CDY15204 Canola plasma membrane 34.44 34.16
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 33.33 34.09
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 31.67 33.83
Bra000925.1-P Field mustard plasma membrane 32.22 33.82
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 34.17 33.7
AT4G01430.1 Thale cress plasma membrane 33.89 33.42
CDX91850 Canola plasma membrane 27.5 33.33
CDY70787 Canola golgi, plasma membrane 23.33 32.94
CDY70635 Canola plasma membrane 23.06 32.94
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 25.0 32.85
CDX97244 Canola endoplasmic reticulum, plasma membrane 25.0 32.85
CDX97247 Canola plasma membrane 32.78 32.69
CDX91847 Canola plasma membrane 31.67 31.93
CDY32446 Canola plasma membrane 32.5 31.79
Bra032618.1-P Field mustard plasma membrane 32.5 31.79
CDY37472 Canola cytosol, golgi, plasma membrane 32.22 31.52
Os01t0297700-01 Rice plasma membrane 32.78 31.22
Bra036199.1-P Field mustard plasma membrane 34.72 31.17
Os04t0687800-01 Rice plasma membrane 34.72 30.34
Os08t0402800-01 Rice golgi, plasma membrane, vacuole 28.89 29.97
Bra008546.1-P Field mustard cytosol, extracellular, plastid 19.17 29.74
CDX97245 Canola plastid 8.89 28.57
Bra020740.1-P Field mustard extracellular 15.83 28.22
Os10t0199500-01 Rice golgi, plasma membrane, vacuole 17.22 27.07
Os10t0163130-01 Rice plasma membrane 26.67 26.09
Os06t0109200-01 Rice plasma membrane 25.56 25.7
Os10t0198900-00 Rice plasma membrane 25.0 25.14
Os12t0288000-02 Rice golgi, plasma membrane 26.94 24.74
CDX86350 Canola plasma membrane 37.5 22.24
Os10t0197700-00 Rice plasma membrane 25.28 21.82
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 41.11 20.08
Os05t0357500-00 Rice cytosol 19.17 17.78
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5EntrezGene:4339879EMBL:AK059047ProteinID:BAD67690.1ProteinID:BAD67893.1ProteinID:BAF18489.1
ProteinID:BAS95776.1ProteinID:EEE64961.1InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:Os06g0109300EnsemblPlants:Os06t0109300-01PFAM:PF00892PANTHER:PTHR31218
PANTHER:PTHR31218:SF56UniProt:Q5VRN2SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0000457C48InterPro:WAT1-related
RefSeq:XP_015642026.1SEG:seg::::
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os06t0109300-01)
Coordinates
chr6:+:546504..550375
Molecular Weight (calculated)
39320.6 Da
IEP (calculated)
9.698
GRAVY (calculated)
0.541
Length
360 amino acids
Sequence
(BLAST)
001: MWRAGCMEQW MPTVSMVATN VVIAIMTALI KQALNQGMNR LVLITFRQMV ATVFLGPIAY FKERKTRPKF TTEIFVYMFL SGMLGPVLLQ YTLFVGLEFT
101: TATFAATFGN LLPVVTFLIS LVFRFEALNV KSRSGSAKIS GTLVSLSGAM MLTFYKGSAL THTPSSSSSP ASSSSHSQAE EHDTAHWVLG SVSLLANVVG
201: FALWLMLQRK FTRKYPAIYS ATAFMSLFSC LQAGALALSI QRSSISIWAL KGKIEIATVV YCGVVASGFG YLMLTYCVEK RGPVFTAAFS PLSQIFVAGI
301: DLFILHEPLY LGSVLGSVLV IVGLYLVLWG KREETAAVSK DAIASPEKPV QDVEQQQEKV
Best Arabidopsis Sequence Match ( AT1G01070.1 )
(BLAST)
001: MAGDMQGVRV VEKYSPVIVM VMSNVAMGSV NALVKKALDV GVNHMVIGAY RMAISALILV PFAYVLERKT RPQITFRLMV DHFVSGLLGA SLMQFFFLLG
101: LSYTSATVSC ALVSMLPAIT FALALIFRTE NVKILKTKAG MLKVIGTLIC ISGALFLTFY KGPQISNSHS HSHGGASHNN NDQDKANNWL LGCLYLTIGT
201: VLLSLWMLFQ GTLSIKYPCK YSSTCLMSIF AAFQCALLSL YKSRDVNDWI IDDRFVITVI IYAGVVGQAM TTVATTWGIK KLGAVFASAF FPLTLISATL
301: FDFLILHTPL YLGSVIGSLV TITGLYMFLW GKNKETESST ALSSGMDNEA QYTTPNKDND SKSPV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WFU3]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.