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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER87705 Sorghum plasma membrane 76.86 76.02
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 77.14 75.47
HORVU7Hr1G002200.2 Barley plasma membrane 76.31 75.27
TraesCS7A01G020400.1 Wheat plasma membrane 76.03 74.39
TraesCS4A01G472400.1 Wheat plasma membrane 76.03 73.21
HORVU7Hr1G019700.4 Barley plasma membrane 69.7 70.87
TraesCS7D01G082900.1 Wheat plasma membrane 69.42 70.59
TraesCS4B01G086600.1 Wheat plasma membrane 68.04 69.58
Zm00001d045576_P001 Maize plasma membrane 76.03 69.52
TraesCS7A01G087800.1 Wheat plasma membrane 69.15 62.28
TraesCS4A01G386700.1 Wheat plasma membrane 67.49 60.64
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 48.48 46.68
Os06t0109300-01 Rice golgi, plasma membrane 46.01 46.39
Os04t0422300-01 Rice plasma membrane 45.45 44.12
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 41.87 41.3
KRH58997 Soybean plasma membrane 39.12 39.78
VIT_01s0010g03480.t01 Wine grape plasma membrane 39.12 39.23
KRH11051 Soybean plasma membrane 39.94 38.77
VIT_01s0010g03450.t01 Wine grape plasma membrane 38.29 38.4
Solyc12g099580.1.1 Tomato plasma membrane 38.02 38.33
PGSC0003DMT400011804 Potato plasma membrane 38.02 38.33
CDY60103 Canola plasma membrane 11.29 37.96
PGSC0003DMT400029440 Potato plasma membrane 24.79 37.82
CDX83041 Canola plasma membrane 32.23 36.34
Solyc04g007590.1.1 Tomato nucleus 34.71 36.31
Solyc01g066850.2.1 Tomato plasma membrane 39.12 36.04
CDY69734 Canola plasma membrane 29.75 36.0
KRG90631 Soybean plasma membrane 34.16 35.84
CDY51711 Canola plasma membrane 35.81 35.81
Bra037413.1-P Field mustard plasma membrane 35.81 35.81
Bra000926.1-P Field mustard plasma membrane 32.23 35.78
Bra033290.1-P Field mustard plasma membrane 34.99 35.77
AT4G01450.2 Thale cress plasma membrane 35.54 35.73
CDY32447 Canola plasma membrane 29.48 35.67
CDX68485 Canola plasma membrane 31.41 35.51
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 33.88 35.45
AT4G01440.1 Thale cress plasma membrane 35.54 35.34
KRH42891 Soybean plasma membrane 38.29 35.28
CDY07144 Canola plasma membrane 35.26 35.16
AT4G01430.1 Thale cress plasma membrane 35.26 35.07
CDX90005 Canola plasma membrane 34.99 34.99
CDY70635 Canola plasma membrane 24.24 34.92
CDY55329 Canola plasma membrane 34.71 34.9
Bra000923.1-P Field mustard plasma membrane 34.44 34.82
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 34.99 34.79
CDY15204 Canola plasma membrane 34.71 34.71
Bra032617.1-P Field mustard plasma membrane 34.44 34.63
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 19.83 34.45
Bra029909.1-P Field mustard plasma membrane 23.97 34.39
CDX91849 Canola plasma membrane 34.16 34.25
CDX74385 Canola plasma membrane 34.16 34.25
CDY32446 Canola plasma membrane 34.71 34.24
Bra032618.1-P Field mustard plasma membrane 34.71 34.24
CDY35779 Canola plasma membrane 34.16 34.16
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 31.68 34.12
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 33.06 34.09
CDX74381 Canola plasma membrane 34.16 34.07
AT3G30340.1 Thale cress plasma membrane 34.16 34.07
CDX91850 Canola plasma membrane 27.82 34.01
CDY37472 Canola cytosol, golgi, plasma membrane 34.44 33.97
KRH40897 Soybean plasma membrane 35.81 33.94
CDY66443 Canola plasma membrane 33.88 33.88
Bra008548.1-P Field mustard extracellular, plasma membrane 32.51 33.81
CDX97249 Canola plasma membrane 33.61 33.7
CDY45904 Canola plasma membrane 33.61 33.61
KRG89109 Soybean plasma membrane 35.26 33.42
CDX97244 Canola endoplasmic reticulum, plasma membrane 25.07 33.21
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 25.07 33.21
CDY01936 Canola plasma membrane 33.06 33.15
Bra000925.1-P Field mustard plasma membrane 31.13 32.94
CDY70787 Canola golgi, plasma membrane 22.59 32.16
PGSC0003DMT400015286 Potato plasma membrane 31.96 31.52
CDX91847 Canola plasma membrane 30.85 31.37
CDX97245 Canola plastid 9.64 31.25
Os01t0297700-01 Rice plasma membrane 32.23 30.95
CDX97247 Canola plasma membrane 30.03 30.19
Os04t0687800-01 Rice plasma membrane 33.88 29.85
KRH04198 Soybean extracellular, plasma membrane, vacuole 20.11 29.08
Bra036199.1-P Field mustard plasma membrane 31.68 28.68
Os08t0402800-01 Rice golgi, plasma membrane, vacuole 26.72 27.95
Os10t0163130-01 Rice plasma membrane 27.27 26.9
Os06t0109200-01 Rice plasma membrane 26.45 26.82
Bra020740.1-P Field mustard extracellular 14.88 26.73
Bra008546.1-P Field mustard cytosol, extracellular, plastid 16.8 26.29
Os10t0199500-01 Rice golgi, plasma membrane, vacuole 15.98 25.33
Os10t0198900-00 Rice plasma membrane 23.97 24.3
Os10t0197700-00 Rice plasma membrane 27.27 23.74
Os12t0288000-02 Rice golgi, plasma membrane 25.07 23.21
CDX86350 Canola plasma membrane 33.88 20.26
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 40.22 19.81
Os05t0357500-00 Rice cytosol 16.8 15.72
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5EntrezGene:9270724ProteinID:BAA85424.2ProteinID:BAD67718.1ProteinID:BAS95761.1ncoils:Coil
ProteinID:EEE64956.1InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085EnsemblPlantsGene:Os06g0107600EnsemblPlants:Os06t0107600-01PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF66
UniProt:Q9LX06SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI00000A2A7CInterPro:WAT1-relatedRefSeq:XP_015640979.1
SEG:seg:::::
Description
Similar to nodulin protein. (Os06t0107600-01);Hypothetical conserved gene. (Os06t0107600-02)
Coordinates
chr6:+:477098..479156
Molecular Weight (calculated)
39774.7 Da
IEP (calculated)
10.206
GRAVY (calculated)
0.676
Length
363 amino acids
Sequence
(BLAST)
001: MGWWLGGGLP VIAMLALNVV AAVLVSLVKV AMDGGLNPLV LVTLQQLTAA IFLGPIAYFK ERKSRPKLTL EIFTYLFVSA ALGAALRQYM IFVALRYTTA
101: TFVTAFSNIA PVLTFLLAIL TRSESLNLRR KTGIAKLVGT LISVAGAMVL TFYKGVAVTH TTKIHHATAA AAVAAEAAMS SRNWTLGTVA ILGNCVCLSC
201: WFLLHSRLAK KYPHVYSCNA FMCMFSFLQV AVVGLSTQRN VSVWIVRTKF HILTILYAGV VGCGLSFVLL TWCIEKRGPV FVAAFIPVVQ IIVSVIDFTV
301: LHEQLFLGSV LGSVLVIGGL YLLLWGKRQE ALHLPPKVAE HDKEQQQQQQ QQQQQQQQQQ VQL
Best Arabidopsis Sequence Match ( AT3G30340.1 )
(BLAST)
001: MVKFDTKLWK AVLMMSMINI GLSVVNVMFK KMIDEGLNRM VATTYRLAVG TLFLIPFAIF LERHNRPKLT GRILCSLFFS ALLGTSLVQY FFLIGLEYTS
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSGIV GSGLCYVGMS WCLRQRGAVF TSSFIPLIQV FAAIFSFSFL
301: HEQIYCGSVI GSMVIIVGLY ILLWGKSKDK SASVTKQEPL DLDIEGCGTA PKELNSTAHQ VSAK
Arabidopsis Description
WAT1-related protein At3g30340 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI65]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.