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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68485 Canola plasma membrane 96.89 97.2
CDY69734 Canola plasma membrane 81.99 88.0
Bra029909.1-P Field mustard plasma membrane 68.94 87.75
CDY60103 Canola plasma membrane 27.95 83.33
CDX74385 Canola plasma membrane 86.65 77.07
CDX97249 Canola plasma membrane 82.61 73.48
CDX91847 Canola plasma membrane 81.06 73.11
CDY01936 Canola plasma membrane 81.99 72.93
CDX74381 Canola plasma membrane 82.3 72.8
CDX91849 Canola plasma membrane 81.06 72.1
AT4G01450.2 Thale cress plasma membrane 79.5 70.91
CDX91850 Canola plasma membrane 63.66 69.02
CDY01937 Canola extracellular, plasma membrane, vacuole 24.53 63.2
CDY07144 Canola plasma membrane 59.63 52.75
CDY51711 Canola plasma membrane 59.01 52.34
CDY00079 Canola extracellular 12.11 46.43
CDX97247 Canola plasma membrane 51.55 45.98
CDX97245 Canola plastid 15.53 44.64
CDY32447 Canola plasma membrane 40.99 44.0
CDX90005 Canola plasma membrane 49.38 43.8
CDY15204 Canola plasma membrane 49.38 43.8
CDY55329 Canola plasma membrane 49.07 43.77
CDY70635 Canola plasma membrane 32.92 42.06
CDY32446 Canola plasma membrane 47.83 41.85
CDY37472 Canola cytosol, golgi, plasma membrane 47.83 41.85
CDY70787 Canola golgi, plasma membrane 32.92 41.57
Solyc04g007590.1.1 Tomato nucleus 43.48 40.35
CDX97244 Canola endoplasmic reticulum, plasma membrane 34.16 40.15
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 42.55 39.48
VIT_01s0010g03480.t01 Wine grape plasma membrane 43.79 38.95
VIT_01s0010g03450.t01 Wine grape plasma membrane 43.48 38.67
KRG90631 Soybean plasma membrane 41.3 38.44
CDY35779 Canola plasma membrane 42.55 37.74
CDY45904 Canola plasma membrane 42.55 37.74
CDY66443 Canola plasma membrane 42.55 37.74
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 37.58 37.35
KRH40897 Soybean plasma membrane 44.41 37.34
KRG89109 Soybean plasma membrane 43.48 36.55
TraesCS6B01G015400.1 Wheat plasma membrane 38.2 35.45
TraesCS6A01G008800.2 Wheat plasma membrane 38.51 35.33
PGSC0003DMT400015286 Potato plasma membrane 40.06 35.05
TraesCS6D01G009800.1 Wheat plasma membrane 37.58 34.38
OQU75691 Sorghum plasma membrane 37.58 34.18
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 37.89 34.17
TraesCS5A01G015800.1 Wheat plasma membrane 34.78 33.94
KRH04198 Soybean extracellular, plasma membrane, vacuole 26.4 33.86
CDY64463 Canola plasma membrane 13.35 33.86
TraesCS1B01G041700.1 Wheat plasma membrane 33.23 33.54
TraesCS5D01G021800.1 Wheat plasma membrane 34.47 33.43
TraesCS6A01G008700.1 Wheat plasma membrane 36.34 33.43
TraesCS6D01G009900.2 Wheat plasma membrane 36.34 33.43
Os06t0109300-01 Rice golgi, plasma membrane 36.96 33.06
TraesCS6D01G044200.1 Wheat plasma membrane 33.85 33.03
GSMUA_Achr1P06340_001 Banana extracellular, golgi 35.71 32.58
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 35.4 32.57
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 35.4 32.57
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 35.4 32.39
HORVU6Hr1G000600.1 Barley plasma membrane 35.71 32.3
Zm00001d054081_P001 Maize plasma membrane 35.09 32.29
Os06t0107600-01 Rice plasma membrane 36.34 32.23
HORVU6Hr1G000500.17 Barley plasma membrane 36.02 32.22
TraesCS6A01G009400.1 Wheat plasma membrane 35.4 32.2
TraesCS6B01G014700.1 Wheat plasma membrane 35.4 32.2
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 37.58 32.1
TraesCS6D01G012400.1 Wheat plasma membrane 35.09 31.92
TraesCS5B01G014100.1 Wheat plasma membrane 34.47 31.9
TraesCS7A01G024900.1 Wheat plasma membrane 36.34 31.88
Zm00001d054085_P001 Maize plasma membrane 34.16 31.79
TraesCS7D01G022800.1 Wheat plasma membrane 36.02 31.69
EER87705 Sorghum plasma membrane 36.02 31.61
TraesCS4B01G086600.1 Wheat plasma membrane 34.78 31.55
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 17.39 31.46
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 35.4 31.41
TraesCS6B01G015700.1 Wheat plasma membrane 34.47 31.27
TraesCS4A01G464100.1 Wheat plasma membrane 36.02 31.27
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 17.08 30.9
EES04319 Sorghum extracellular, golgi, plasma membrane 34.78 30.85
HORVU7Hr1G019700.4 Barley plasma membrane 34.16 30.81
Os04t0422300-01 Rice plasma membrane 35.4 30.48
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 35.09 30.46
HORVU7Hr1G002200.2 Barley plasma membrane 34.78 30.43
OQU84142 Sorghum plasma membrane 35.4 30.4
TraesCS7D01G082900.1 Wheat plasma membrane 33.54 30.25
TraesCS7A01G020400.1 Wheat plasma membrane 34.47 29.92
TraesCS4A01G472400.1 Wheat plasma membrane 34.78 29.71
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 23.91 29.5
Zm00001d045576_P001 Maize plasma membrane 36.02 29.22
TraesCS7A01G087800.1 Wheat plasma membrane 34.78 27.79
TraesCS4D01G164600.1 Wheat plasma membrane 23.6 27.74
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 23.29 27.57
TraesCS4A01G386700.1 Wheat plasma membrane 34.16 27.23
CDY64772 Canola plasma membrane 24.53 26.07
TraesCS6A01G038300.1 Wheat plasma membrane 19.57 26.03
CDY42121 Canola plasma membrane 27.33 25.58
CDY06357 Canola plasma membrane 23.29 25.34
CDY24356 Canola plasma membrane 27.95 24.79
CDY64689 Canola plasma membrane 26.09 24.28
CDY59354 Canola plasma membrane 28.57 24.08
CDX94976 Canola plasma membrane 28.57 23.9
CDX94974 Canola plasma membrane 28.26 23.64
CDY69907 Canola plasma membrane 28.26 23.64
HORVU5Hr1G067230.40 Barley mitochondrion 36.34 23.17
CDY12698 Canola plasma membrane 27.33 23.16
CDX81497 Canola plasma membrane 27.33 23.1
CDY62464 Canola plasma membrane 26.4 23.04
CDX86350 Canola plasma membrane 42.55 22.57
GSMUA_Achr7P17540_001 Banana plasma membrane 36.34 20.49
HORVU5Hr1G002470.1 Barley golgi 14.91 19.28
Os06t0109200-01 Rice plasma membrane 20.81 18.72
CDY62465 Canola extracellular, plasma membrane, vacuole 13.66 18.03
Zm00001d045567_P001 Maize plasma membrane 36.65 15.36
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:CDX83041EnsemblPlantsGene:GSBRNA2T00138526001GO:A0A078D119GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF10PFAM:PF00892ProteinID:CDX83041ProteinID:CDX83041.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE3667MapMan:24.2.1.5:
Description
BnaA01g20410D
Coordinates
chrLK031831:-:1017694..1024203
Molecular Weight (calculated)
35495.4 Da
IEP (calculated)
9.970
GRAVY (calculated)
0.632
Length
322 amino acids
Sequence
(BLAST)
001: MGFIDGKSAP VIIMIIVINM INGLVNALTK KVLDGGINHM IIATYRLGIS TFFLLPIAYF WERNTRPKLT TSISFQLFVS GLFGASLMQY FYLLGLSYTS
101: ATLGSAFWGT LPAITFILAL IFRFEKLSVK TKAGYGVVLG AMISLAGALI LTLYQGIPLS NPHEHATISH IQKGHENWIK GCTVILSVFG TLQCALLSLI
201: KTRHVEDWIL RDKLTIITVI IAGVGAQGMC TVGISWCIKQ RGPVFTSAFS PVTLMFATVF DFLILHRIIY LGSVIGSVVV IIGLYIFLWS KRKQIDISKI
301: TKLPTTTVKE GKEEEDHTNV NN
Best Arabidopsis Sequence Match ( AT4G01440.1 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.