Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 2
- extracellular 2
- golgi 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00079 | Canola | extracellular | 34.4 | 51.19 |
| CDX97247 | Canola | plasma membrane | 96.0 | 33.24 |
| CDY51711 | Canola | plasma membrane | 88.0 | 30.3 |
| CDY07144 | Canola | plasma membrane | 88.0 | 30.22 |
| CDY70635 | Canola | plasma membrane | 54.4 | 26.98 |
| CDY69734 | Canola | plasma membrane | 62.4 | 26.0 |
| CDX68485 | Canola | plasma membrane | 63.2 | 24.61 |
| CDX83041 | Canola | plasma membrane | 63.2 | 24.53 |
| CDX97244 | Canola | endoplasmic reticulum, plasma membrane | 50.4 | 22.99 |
| CDY70787 | Canola | golgi, plasma membrane | 46.4 | 22.75 |
| CDY01936 | Canola | plasma membrane | 65.6 | 22.65 |
| CDX97249 | Canola | plasma membrane | 65.6 | 22.65 |
| CDX74385 | Canola | plasma membrane | 63.2 | 21.82 |
| CDX91849 | Canola | plasma membrane | 62.4 | 21.55 |
| CDX74381 | Canola | plasma membrane | 62.4 | 21.43 |
| CDY15204 | Canola | plasma membrane | 57.6 | 19.83 |
| CDY55329 | Canola | plasma membrane | 56.8 | 19.67 |
| CDX90005 | Canola | plasma membrane | 56.8 | 19.56 |
| CDY32446 | Canola | plasma membrane | 56.8 | 19.29 |
| CDY37472 | Canola | cytosol, golgi, plasma membrane | 56.8 | 19.29 |
| CDX91850 | Canola | plasma membrane | 44.0 | 18.52 |
| CDX91847 | Canola | plasma membrane | 52.8 | 18.49 |
| CDY35779 | Canola | plasma membrane | 53.6 | 18.46 |
| CDY45904 | Canola | plasma membrane | 52.8 | 18.18 |
| HORVU4Hr1G034530.1 | Barley | golgi, plasma membrane | 26.4 | 18.13 |
| CDY66443 | Canola | plasma membrane | 52.0 | 17.91 |
| CDY32447 | Canola | plasma membrane | 32.8 | 13.67 |
| CDX94976 | Canola | plasma membrane | 35.2 | 11.43 |
| CDY69907 | Canola | plasma membrane | 35.2 | 11.43 |
| CDX94974 | Canola | plasma membrane | 35.2 | 11.43 |
| CDX86350 | Canola | plasma membrane | 52.0 | 10.71 |
| CDY64689 | Canola | plasma membrane | 29.6 | 10.69 |
| CDY62464 | Canola | plasma membrane | 29.6 | 10.03 |
| CDY12698 | Canola | plasma membrane | 29.6 | 9.74 |
| CDX81497 | Canola | plasma membrane | 29.6 | 9.71 |
| CDY42121 | Canola | plasma membrane | 26.4 | 9.59 |
| CDY24356 | Canola | plasma membrane | 27.2 | 9.37 |
| CDY59354 | Canola | plasma membrane | 28.0 | 9.16 |
| CDY64772 | Canola | plasma membrane | 21.6 | 8.91 |
| CDY06357 | Canola | plasma membrane | 17.6 | 7.43 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 8.0 | 4.1 |
| CDX97245 | Canola | plastid | 2.4 | 2.68 |
| CDY64463 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY60103 | Canola | plasma membrane | 0.0 | 0.0 |
| VIT_11s0052g00570.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078ELA7 | EnsemblPlants:CDY01937 | ProteinID:CDY01937 | ProteinID:CDY01937.1 | InterPro:EamA_dom |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | EnsemblPlantsGene:GSBRNA2T00113205001 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF10 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EF3090 | InterPro:WAT1-related | : | : |
Description
BnaC02g27900D
Coordinates
chrLK031930:-:567124..568033
Molecular Weight (calculated)
13984.6 Da
IEP (calculated)
9.912
GRAVY (calculated)
0.823
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYCDGKWTP VIIMITINSA LGLGNAMVKK VLDGGFNHMV IETYRLAIST VCLAPIAFFW ERKTRPKLTL NILVQLFFSA LIGFFRASLT QYFFLMGLSY
101: TSATLACAFI SMSPAVTFVM SLIFR
101: TSATLACAFI SMSPAVTFVM SLIFR
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.