Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69907 | Canola | plasma membrane | 95.06 | 95.06 |
| Bra020026.1-P | Field mustard | plasma membrane | 94.81 | 94.81 |
| CDX94976 | Canola | plasma membrane | 94.55 | 94.55 |
| CDY64772 | Canola | plasma membrane | 70.39 | 89.44 |
| CDY06357 | Canola | plasma membrane | 68.05 | 88.51 |
| AT1G09380.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 83.64 | 86.1 |
| Solyc01g100880.2.1 | Tomato | plasma membrane | 51.95 | 55.87 |
| PGSC0003DMT400007108 | Potato | plasma membrane | 48.57 | 55.65 |
| KRG96698 | Soybean | extracellular, golgi, plasma membrane | 52.99 | 55.59 |
| KRG96712 | Soybean | extracellular, golgi, plasma membrane | 52.99 | 55.59 |
| KRH68417 | Soybean | extracellular, golgi, plasma membrane | 52.21 | 54.92 |
| KRG90488 | Soybean | plasma membrane | 51.69 | 53.07 |
| KRH33776 | Soybean | endoplasmic reticulum | 51.95 | 53.05 |
| Solyc12g035400.1.1 | Tomato | plasma membrane | 45.97 | 50.43 |
| PGSC0003DMT400010825 | Potato | plasma membrane | 45.19 | 49.29 |
| Solyc01g100890.2.1 | Tomato | plasma membrane | 47.27 | 48.4 |
| Solyc12g096850.1.1 | Tomato | plasma membrane | 43.9 | 48.01 |
| Solyc01g100910.2.1 | Tomato | plasma membrane | 44.94 | 47.27 |
| Os01t0297700-01 | Rice | plasma membrane | 45.97 | 46.83 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 45.45 | 46.67 |
| GSMUA_Achr9P16660_001 | Banana | golgi, plasma membrane, vacuole | 45.45 | 46.54 |
| Solyc01g100900.2.1 | Tomato | golgi, plasma membrane, vacuole | 44.42 | 46.47 |
| Solyc01g100920.2.1 | Tomato | golgi, plasma membrane, vacuole | 44.94 | 45.89 |
| PGSC0003DMT400075201 | Potato | mitochondrion | 21.3 | 45.81 |
| TraesCSU01G213700.1 | Wheat | plasma membrane | 38.18 | 45.23 |
| HORVU3Hr1G040230.1 | Barley | plasma membrane | 45.19 | 45.19 |
| TraesCS3D01G199100.1 | Wheat | extracellular, golgi, plasma membrane | 44.42 | 44.42 |
| EES00623 | Sorghum | plasma membrane | 45.97 | 44.25 |
| TraesCS3B01G227600.1 | Wheat | extracellular, golgi, plasma membrane | 44.16 | 44.16 |
| Zm00001d040593_P001 | Maize | plasma membrane | 44.68 | 43.99 |
| HORVU7Hr1G108550.2 | Barley | plasma membrane | 43.38 | 43.83 |
| TraesCS3A01G196000.1 | Wheat | plasma membrane | 42.6 | 43.27 |
| TraesCS7A01G477400.1 | Wheat | plasma membrane | 42.08 | 43.09 |
| TraesCS7B01G379400.1 | Wheat | plasma membrane | 41.82 | 42.82 |
| TraesCS7B01G379300.1 | Wheat | plasma membrane | 41.82 | 42.82 |
| TraesCS7D01G464900.2 | Wheat | plasma membrane | 41.56 | 42.44 |
| Zm00001d009063_P001 | Maize | plasma membrane | 43.38 | 42.07 |
| TraesCS7A01G477500.1 | Wheat | plasma membrane | 41.56 | 41.67 |
| TraesCS7A01G526900.1 | Wheat | plasma membrane | 32.73 | 40.91 |
| TraesCS7B01G379000.1 | Wheat | plasma membrane | 40.52 | 40.84 |
| TraesCS7D01G472200.2 | Wheat | plasma membrane | 37.14 | 39.72 |
| TraesCS7D01G465000.1 | Wheat | plasma membrane | 40.0 | 39.69 |
| TraesCS7B01G388500.1 | Wheat | plasma membrane | 36.62 | 39.06 |
| CDY01937 | Canola | extracellular, plasma membrane, vacuole | 11.43 | 35.2 |
| CDY64689 | Canola | plasma membrane | 28.31 | 31.5 |
| CDY60103 | Canola | plasma membrane | 8.83 | 31.48 |
| CDY66443 | Canola | plasma membrane | 29.35 | 31.13 |
| CDY45904 | Canola | plasma membrane | 29.09 | 30.85 |
| CDY24356 | Canola | plasma membrane | 29.09 | 30.85 |
| CDY35779 | Canola | plasma membrane | 29.09 | 30.85 |
| CDY42121 | Canola | plasma membrane | 27.27 | 30.52 |
| CDY32447 | Canola | plasma membrane | 23.64 | 30.33 |
| CDX81497 | Canola | plasma membrane | 29.87 | 30.18 |
| CDY70635 | Canola | plasma membrane | 19.74 | 30.16 |
| CDY12698 | Canola | plasma membrane | 29.61 | 30.0 |
| CDY64463 | Canola | plasma membrane | 9.87 | 29.92 |
| CDY62464 | Canola | plasma membrane | 28.57 | 29.81 |
| CDY70787 | Canola | golgi, plasma membrane | 19.74 | 29.8 |
| CDY15204 | Canola | plasma membrane | 27.79 | 29.48 |
| CDX90005 | Canola | plasma membrane | 27.79 | 29.48 |
| CDY55329 | Canola | plasma membrane | 27.53 | 29.36 |
| CDY69734 | Canola | plasma membrane | 22.86 | 29.33 |
| CDY07144 | Canola | plasma membrane | 27.53 | 29.12 |
| CDY59354 | Canola | plasma membrane | 28.83 | 29.06 |
| CDY51711 | Canola | plasma membrane | 27.27 | 28.93 |
| CDY32446 | Canola | plasma membrane | 27.01 | 28.26 |
| CDY37472 | Canola | cytosol, golgi, plasma membrane | 27.01 | 28.26 |
| CDX83041 | Canola | plasma membrane | 23.64 | 28.26 |
| CDX97244 | Canola | endoplasmic reticulum, plasma membrane | 20.0 | 28.1 |
| CDX68485 | Canola | plasma membrane | 23.38 | 28.04 |
| CDX74385 | Canola | plasma membrane | 26.23 | 27.9 |
| CDX91847 | Canola | plasma membrane | 25.45 | 27.45 |
| CDY00079 | Canola | extracellular | 5.97 | 27.38 |
| CDX91849 | Canola | plasma membrane | 25.71 | 27.35 |
| CDX97249 | Canola | plasma membrane | 25.45 | 27.07 |
| CDY01936 | Canola | plasma membrane | 25.45 | 27.07 |
| CDX91850 | Canola | plasma membrane | 20.78 | 26.94 |
| CDX74381 | Canola | plasma membrane | 25.45 | 26.92 |
| CDX97247 | Canola | plasma membrane | 24.42 | 26.04 |
| CDX97245 | Canola | plastid | 7.53 | 25.89 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 15.32 | 24.18 |
| CDX86350 | Canola | plasma membrane | 29.35 | 18.62 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078E300 | EnsemblPlants:CDX94974 | ProteinID:CDX94974 | ProteinID:CDX94974.1 | ncoils:Coil |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00100465001 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF11 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE92FC | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g06970D
Coordinates
chrLK031886:+:508097..511280
Molecular Weight (calculated)
41612.2 Da
IEP (calculated)
8.464
GRAVY (calculated)
0.478
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKSRDLLPS LAMVLVQIGY AGMNITSKMA MESGMKPLIL VAYRQIFATI ATFPVAFFLE RKTRPKITLT VLVQIFFCSI TGVTGNQVLY FIGLQNSSPT
101: IACALTNLLP AVTFLLAAIF RQEAVGIRKA SGQAKVIGTV VCVAGAMVLS FYHGHTIGIG ESKIHWAYAQ NITNHGSDSN GSNFFLGPFM IMAAAVSWAV
201: WFIIQTKMSE TFAAPYTSTL LMCLMGSIEC GGIALISDHK LADWSLSSPL RLISALYAGV VASALAFCLM SWAIQIKGPL YVSVFSPLLL VVVAVFSWTL
301: LEEKLYTGTF MGSALVVIGL FGVLWGKDRE MNENQDQEDN QKKVKQQHTV KSDFKDDIES RLPVGEEGGA STSGCGNGAT RLVSP
101: IACALTNLLP AVTFLLAAIF RQEAVGIRKA SGQAKVIGTV VCVAGAMVLS FYHGHTIGIG ESKIHWAYAQ NITNHGSDSN GSNFFLGPFM IMAAAVSWAV
201: WFIIQTKMSE TFAAPYTSTL LMCLMGSIEC GGIALISDHK LADWSLSSPL RLISALYAGV VASALAFCLM SWAIQIKGPL YVSVFSPLLL VVVAVFSWTL
301: LEEKLYTGTF MGSALVVIGL FGVLWGKDRE MNENQDQEDN QKKVKQQHTV KSDFKDDIES RLPVGEEGGA STSGCGNGAT RLVSP
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.