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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008548.1-P Field mustard extracellular, plasma membrane 96.41 100.0
CDY01936 Canola plasma membrane 98.89 98.89
CDY60103 Canola plasma membrane 26.24 87.96
CDX74385 Canola plasma membrane 87.57 87.57
CDX91847 Canola plasma membrane 83.43 84.59
CDX74381 Canola plasma membrane 84.53 84.07
CDX91849 Canola plasma membrane 83.98 83.98
CDY69734 Canola plasma membrane 68.78 83.0
CDX83041 Canola plasma membrane 73.48 82.61
CDX68485 Canola plasma membrane 72.65 81.93
AT4G01450.2 Thale cress plasma membrane 80.11 80.33
CDX91850 Canola plasma membrane 64.09 78.11
CDY01937 Canola extracellular, plasma membrane, vacuole 22.65 65.6
CDY07144 Canola plasma membrane 59.39 59.07
CDY51711 Canola plasma membrane 58.84 58.68
CDX97247 Canola plasma membrane 52.21 52.35
CDY00079 Canola extracellular 11.6 50.0
CDY70787 Canola golgi, plasma membrane 34.53 49.02
CDY15204 Canola plasma membrane 48.07 47.93
CDY32447 Canola plasma membrane 39.5 47.67
CDX90005 Canola plasma membrane 47.79 47.66
CDY55329 Canola plasma membrane 47.24 47.37
CDY70635 Canola plasma membrane 32.87 47.22
CDX97244 Canola endoplasmic reticulum, plasma membrane 35.64 47.08
CDY32446 Canola plasma membrane 46.13 45.38
CDY37472 Canola cytosol, golgi, plasma membrane 46.13 45.38
Solyc04g007590.1.1 Tomato nucleus 43.37 45.24
VIT_01s0010g03480.t01 Wine grape plasma membrane 43.65 43.65
VIT_01s0010g03450.t01 Wine grape plasma membrane 43.37 43.37
KRG90631 Soybean plasma membrane 41.16 43.06
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 41.16 42.94
CDX97245 Canola plastid 13.26 42.86
CDY66443 Canola plasma membrane 42.82 42.7
KRH40897 Soybean plasma membrane 45.03 42.56
CDY45904 Canola plasma membrane 41.71 41.6
KRG89109 Soybean plasma membrane 43.92 41.51
CDY35779 Canola plasma membrane 41.44 41.32
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 35.64 39.81
TraesCS6B01G015400.1 Wheat plasma membrane 37.57 39.19
PGSC0003DMT400015286 Potato plasma membrane 39.5 38.86
TraesCS6A01G008800.2 Wheat plasma membrane 37.57 38.75
KRH04198 Soybean extracellular, plasma membrane, vacuole 26.8 38.65
TraesCS6D01G009800.1 Wheat plasma membrane 37.29 38.35
GSMUA_Achr1P06340_001 Banana extracellular, golgi 36.46 37.39
OQU75691 Sorghum plasma membrane 36.46 37.29
TraesCS5D01G021800.1 Wheat plasma membrane 33.98 37.05
TraesCS1B01G041700.1 Wheat plasma membrane 32.6 36.99
TraesCS5A01G015800.1 Wheat plasma membrane 33.7 36.97
HORVU6Hr1G000600.1 Barley plasma membrane 36.19 36.8
Zm00001d054085_P001 Maize plasma membrane 35.08 36.71
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 36.19 36.69
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 35.64 36.65
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 35.36 36.57
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 35.36 36.57
TraesCS6D01G044200.1 Wheat plasma membrane 33.15 36.36
TraesCS6A01G009400.1 Wheat plasma membrane 35.36 36.16
TraesCS6B01G014700.1 Wheat plasma membrane 35.36 36.16
TraesCS6D01G012400.1 Wheat plasma membrane 35.36 36.16
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 17.68 35.96
TraesCS6D01G009900.2 Wheat plasma membrane 34.53 35.71
Os06t0109300-01 Rice golgi, plasma membrane 35.36 35.56
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 37.02 35.54
TraesCS6B01G015700.1 Wheat plasma membrane 34.81 35.49
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 17.4 35.39
TraesCS5B01G014100.1 Wheat plasma membrane 33.98 35.34
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 35.36 35.26
TraesCS6A01G008700.1 Wheat plasma membrane 33.98 35.14
OQU84142 Sorghum plasma membrane 36.19 34.93
Zm00001d054081_P001 Maize plasma membrane 33.7 34.86
HORVU6Hr1G000500.17 Barley plasma membrane 34.25 34.44
Os04t0422300-01 Rice plasma membrane 35.36 34.22
EES04319 Sorghum extracellular, golgi, plasma membrane 34.25 34.16
CDY64463 Canola plasma membrane 11.88 33.86
TraesCS7A01G024900.1 Wheat plasma membrane 34.25 33.79
HORVU7Hr1G019700.4 Barley plasma membrane 33.15 33.61
Os06t0107600-01 Rice plasma membrane 33.7 33.61
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 25.14 33.46
TraesCS4A01G464100.1 Wheat plasma membrane 34.25 33.42
TraesCS7D01G022800.1 Wheat plasma membrane 33.7 33.33
EER87705 Sorghum plasma membrane 33.43 32.97
HORVU7Hr1G002200.2 Barley plasma membrane 33.15 32.61
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 33.15 32.34
TraesCS4B01G086600.1 Wheat plasma membrane 31.49 32.11
TraesCS7A01G020400.1 Wheat plasma membrane 32.6 31.81
TraesCS4D01G164600.1 Wheat plasma membrane 23.76 31.39
TraesCS4A01G472400.1 Wheat plasma membrane 32.6 31.3
TraesCS7D01G082900.1 Wheat plasma membrane 30.66 31.09
TraesCS6A01G038300.1 Wheat plasma membrane 20.72 30.99
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 22.1 30.65
Zm00001d045576_P001 Maize plasma membrane 33.43 30.48
TraesCS7A01G087800.1 Wheat plasma membrane 31.77 28.54
CDY64772 Canola plasma membrane 23.76 28.38
TraesCS4A01G386700.1 Wheat plasma membrane 31.22 27.97
CDY06357 Canola plasma membrane 22.38 27.36
CDY24356 Canola plasma membrane 27.35 27.27
CDY42121 Canola plasma membrane 25.41 26.74
CDX86350 Canola plasma membrane 42.82 25.54
CDX94974 Canola plasma membrane 27.07 25.45
CDX94976 Canola plasma membrane 26.8 25.19
CDY69907 Canola plasma membrane 26.8 25.19
CDY64689 Canola plasma membrane 24.03 25.14
CDY59354 Canola plasma membrane 26.24 24.87
HORVU5Hr1G067230.40 Barley mitochondrion 34.25 24.55
HORVU5Hr1G002470.1 Barley golgi 16.57 24.1
CDY12698 Canola plasma membrane 25.14 23.95
CDX81497 Canola plasma membrane 25.14 23.88
CDY62464 Canola plasma membrane 24.31 23.85
GSMUA_Achr7P17540_001 Banana plasma membrane 36.19 22.94
CDY62465 Canola extracellular, plasma membrane, vacuole 13.81 20.49
Os06t0109200-01 Rice plasma membrane 19.06 19.27
Zm00001d045567_P001 Maize plasma membrane 35.91 16.93
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:CDX97249EnsemblPlantsGene:GSBRNA2T00104262001GO:A0A078E933GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF10PFAM:PF00892ProteinID:CDX97249ProteinID:CDX97249.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EDD93BMapMan:24.2.1.5:
Description
BnaA02g20400D
Coordinates
chrLK031898:+:118838..120558
Molecular Weight (calculated)
40026.0 Da
IEP (calculated)
9.324
GRAVY (calculated)
0.638
Length
362 amino acids
Sequence
(BLAST)
001: MGYLDGKWAP LIMITVINTI NGMVNALIKK VLDGGINHMV IATYRLGIST LFLLPIAYFW ERKTRPKLTT SISCQHFFSA LFGASLMQFF FLLGLSYTSA
101: TLATAFWGTL PALTFIMALI FGFEKLNMKT KIGYGVILGA MISLAGALTL TMYQGIPLSN SHEQATISNI HKGNENWIKG CFLLFTGVIL FSSWMLIQAK
201: INVSYPCPYS STVILSVFGT LQCALLSFIK TRHVEDWILG DKLTIFTVII AGVIGQGMCT VGISWCIKQR GPVFTAAFSP VTLMSATVFD FVILHRMIYV
301: GSVIGSVVVV IGLYIFLWSK SKHIDECKIV TLPTNTVEKE KEEEDHTNVN KLGRVLVIPM TP
Best Arabidopsis Sequence Match ( AT4G01450.2 )
(BLAST)
001: MGFIDGKWAP MIVLIVSNMI AGMVNALVKK VLDGGINHMV IATYRLGIST LFLLPVAYFW ERKTRPKLTL SISCQLFVSA LFGASLMQYF YLLGLSYTSA
101: TLGSAFWAIM PSLTFVMALI FGFEKLSLKT KIGYGVVLGT LISLVGGLLL TMYQGIPLTN SPEQAANSNN HTGHENWIKG CFFLLTGVVL FSSWMLIQAK
201: INVKYPCPYS STVILSVFGT LQCALLSLIK TRHLEDWILR DELTIITVVI AGVVAQGMCT VGMSWCIKQQ GPVVSSSFSP VVLMSATVFD FLILHREIYL
301: GSVIGSVVVV IGLYIFLWSR SKQIVECKIM KLPTNTVEEE KEEEGRTNVN NGQLLVIPMT P
Arabidopsis Description
WAT1-related protein At4g01450 [Source:UniProtKB/Swiss-Prot;Acc:Q9M129]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.