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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G009900.2 Wheat plasma membrane 93.06 95.71
TraesCS6A01G008700.1 Wheat plasma membrane 92.22 94.86
HORVU4Hr1G034530.1 Barley golgi, plasma membrane 39.72 78.57
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 51.67 52.84
HORVU6Hr1G000600.1 Barley plasma membrane 46.67 47.19
HORVU7Hr1G019700.4 Barley plasma membrane 45.28 45.66
HORVU7Hr1G002200.2 Barley plasma membrane 45.0 44.02
KRH58997 Soybean plasma membrane 43.33 43.7
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.83 42.36
KRG90631 Soybean plasma membrane 40.56 42.2
KRH11051 Soybean plasma membrane 43.61 41.98
Solyc12g099580.1.1 Tomato plasma membrane 41.67 41.67
PGSC0003DMT400011804 Potato plasma membrane 41.67 41.67
VIT_01s0010g03480.t01 Wine grape plasma membrane 41.67 41.44
VIT_01s0010g03450.t01 Wine grape plasma membrane 41.39 41.16
CDY60103 Canola plasma membrane 12.22 40.74
PGSC0003DMT400029440 Potato plasma membrane 26.67 40.34
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 41.11 40.22
KRH42891 Soybean plasma membrane 42.78 39.09
Solyc01g066850.2.1 Tomato plasma membrane 42.78 39.09
CDY69734 Canola plasma membrane 32.5 39.0
Solyc04g007590.1.1 Tomato nucleus 36.67 38.04
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 26.67 36.78
KRH40897 Soybean plasma membrane 38.89 36.55
AT4G01440.1 Thale cress plasma membrane 36.94 36.44
Bra029909.1-P Field mustard plasma membrane 25.56 36.36
CDX68485 Canola plasma membrane 32.22 36.14
CDY70635 Canola plasma membrane 25.28 36.11
CDY35779 Canola plasma membrane 36.39 36.09
CDY45904 Canola plasma membrane 36.39 36.09
CDY51711 Canola plasma membrane 36.39 36.09
Bra037413.1-P Field mustard plasma membrane 36.39 36.09
CDX83041 Canola plasma membrane 32.22 36.02
Bra033290.1-P Field mustard plasma membrane 35.28 35.77
AT3G30340.1 Thale cress plasma membrane 36.11 35.71
CDY07144 Canola plasma membrane 35.83 35.44
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 35.83 35.34
CDY15204 Canola plasma membrane 35.56 35.26
CDX90005 Canola plasma membrane 35.56 35.26
KRG89109 Soybean plasma membrane 37.5 35.25
HORVU5Hr1G067230.40 Barley mitochondrion 49.44 35.25
AT4G01450.2 Thale cress plasma membrane 35.28 35.18
Bra000926.1-P Field mustard plasma membrane 31.94 35.17
CDY66443 Canola plasma membrane 35.28 34.99
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 20.28 34.93
CDY55329 Canola plasma membrane 34.44 34.35
Bra032617.1-P Field mustard plasma membrane 34.44 34.35
CDY32447 Canola plasma membrane 28.61 34.33
CDY01936 Canola plasma membrane 34.44 34.25
CDX97249 Canola plasma membrane 34.44 34.25
PGSC0003DMT400015286 Potato plasma membrane 35.0 34.24
CDY70787 Canola golgi, plasma membrane 24.17 34.12
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 33.33 34.09
CDX91850 Canola plasma membrane 28.06 34.01
Bra000923.1-P Field mustard plasma membrane 33.89 33.98
Bra032618.1-P Field mustard plasma membrane 34.72 33.97
CDY37472 Canola cytosol, golgi, plasma membrane 34.72 33.97
CDY32446 Canola plasma membrane 34.72 33.97
HORVU5Hr1G002470.1 Barley golgi 23.33 33.73
CDX91849 Canola plasma membrane 33.89 33.7
CDX74385 Canola plasma membrane 33.89 33.7
AT4G01430.1 Thale cress plasma membrane 34.17 33.7
CDX97244 Canola endoplasmic reticulum, plasma membrane 25.56 33.58
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 25.56 33.58
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 31.39 33.53
Bra008548.1-P Field mustard extracellular, plasma membrane 32.5 33.52
CDX74381 Canola plasma membrane 33.89 33.52
KRH04198 Soybean extracellular, plasma membrane, vacuole 23.06 33.07
Bra000925.1-P Field mustard plasma membrane 31.39 32.94
HORVU2Hr1G074250.2 Barley plasma membrane 33.33 32.7
HORVU3Hr1G040230.1 Barley plasma membrane 34.72 32.47
HORVU4Hr1G070930.2 Barley plasma membrane 33.33 32.43
CDX91847 Canola plasma membrane 31.39 31.65
CDX97247 Canola plasma membrane 31.11 31.02
HORVU2Hr1G121210.3 Barley golgi, plasma membrane 30.83 30.66
HORVU2Hr1G121200.2 Barley extracellular, plasma membrane 15.56 30.6
HORVU7Hr1G108550.2 Barley plasma membrane 31.94 30.18
Bra036199.1-P Field mustard plasma membrane 32.78 29.43
Bra008546.1-P Field mustard cytosol, extracellular, plastid 18.61 28.88
HORVU7Hr1G023010.2 Barley plasma membrane 27.5 28.7
HORVU2Hr1G124740.1 Barley plastid 35.83 28.48
Bra020740.1-P Field mustard extracellular 15.56 27.72
CDX97245 Canola plastid 8.33 26.79
HORVU3Hr1G080200.2 Barley plasma membrane 28.33 24.4
HORVU7Hr1G023000.2 Barley golgi 19.17 23.96
HORVU3Hr1G107360.19 Barley plastid 28.89 22.76
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 43.89 21.44
CDX86350 Canola plasma membrane 35.28 20.92
Protein Annotations
EnsemblPlants:HORVU6Hr1G000500.17EnsemblPlantsGene:HORVU6Hr1G000500GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF25PFAM:PF00892SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI000B46548FUniProt:A0A287T3S8MapMan:24.2.1.5::
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A287T3S8]
Coordinates
chrchr6H:-:1118154..1127826
Molecular Weight (calculated)
38309.7 Da
IEP (calculated)
9.873
GRAVY (calculated)
0.708
Length
360 amino acids
Sequence
(BLAST)
001: MLVDQVCAES MGWMELLKPV AAMIAFDTLF AVMTVLVKKA LDGGLNPVVL IALRQLVGAA FLAPIAYFKE RNVRPRFTKE IFAYLFMSAL LGALFAQYLF
101: FLGLSYTTAT LAATVSNMTP VFTFLIAIPL RSETVDVRSK AGLAKIAGTL ASVGGAILLS LYKGAALTHA SSSAQEHAGN GTTGTSGSKG RWLLGSALLL
201: LNCITFSLWM LLQGKLTKKY PAVISSTAFM ALFSSLQAGA LAVTTQRRLS VWLLRGSIQI ATVLFAGVGV SGIGYVLMTW CIEKRGPVFT AGFLPLIQII
301: AGVLDLLVLH EQLYVGSVVG AALVIGGLYL LLWGKSKEAS SAAVLSQKGL EEDKETQENL
Best Arabidopsis Sequence Match ( AT1G01070.1 )
(BLAST)
001: MAGDMQGVRV VEKYSPVIVM VMSNVAMGSV NALVKKALDV GVNHMVIGAY RMAISALILV PFAYVLERKT RPQITFRLMV DHFVSGLLGA SLMQFFFLLG
101: LSYTSATVSC ALVSMLPAIT FALALIFRTE NVKILKTKAG MLKVIGTLIC ISGALFLTFY KGPQISNSHS HSHGGASHNN NDQDKANNWL LGCLYLTIGT
201: VLLSLWMLFQ GTLSIKYPCK YSSTCLMSIF AAFQCALLSL YKSRDVNDWI IDDRFVITVI IYAGVVGQAM TTVATTWGIK KLGAVFASAF FPLTLISATL
301: FDFLILHTPL YLGSVIGSLV TITGLYMFLW GKNKETESST ALSSGMDNEA QYTTPNKDND SKSPV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WFU3]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.