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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400029440 Potato plasma membrane 55.58 92.02
Solyc12g099580.1.1 Tomato plasma membrane 69.8 76.39
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 56.6 60.6
KRH11051 Soybean plasma membrane 55.58 58.56
KRH58997 Soybean plasma membrane 52.79 58.26
KRH42891 Soybean plasma membrane 53.55 53.55
Solyc04g007590.1.1 Tomato nucleus 44.67 50.72
GSMUA_Achr1P06340_001 Banana extracellular, golgi 42.13 47.03
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 38.32 46.6
TraesCS5A01G015800.1 Wheat plasma membrane 36.8 43.94
Zm00001d054085_P001 Maize plasma membrane 38.58 43.93
TraesCS1B01G041700.1 Wheat plasma membrane 35.53 43.89
TraesCS6B01G015400.1 Wheat plasma membrane 38.58 43.8
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 38.83 43.71
TraesCS5D01G021800.1 Wheat plasma membrane 36.8 43.67
TraesCS6A01G008800.2 Wheat plasma membrane 38.83 43.59
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 38.58 43.43
OQU75691 Sorghum plasma membrane 38.83 43.22
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 38.32 42.9
Os04t0422300-01 Rice plasma membrane 40.61 42.78
HORVU6Hr1G000500.17 Barley plasma membrane 39.09 42.78
TraesCS6D01G012400.1 Wheat plasma membrane 38.32 42.66
TraesCS6B01G014700.1 Wheat plasma membrane 38.32 42.66
TraesCS6D01G009800.1 Wheat plasma membrane 38.07 42.61
TraesCS6A01G008700.1 Wheat plasma membrane 37.82 42.57
TraesCS6D01G044200.1 Wheat plasma membrane 35.53 42.42
TraesCS6A01G009400.1 Wheat plasma membrane 38.07 42.37
TraesCS6D01G009900.2 Wheat plasma membrane 37.56 42.29
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 19.04 42.13
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 19.04 42.13
TraesCS6B01G015700.1 Wheat plasma membrane 37.82 41.97
Os06t0109300-01 Rice golgi, plasma membrane 38.32 41.94
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 38.58 41.87
HORVU6Hr1G000600.1 Barley plasma membrane 37.82 41.85
Zm00001d054081_P001 Maize plasma membrane 37.06 41.71
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 37.31 41.18
TraesCS5B01G014100.1 Wheat plasma membrane 36.29 41.09
EES04319 Sorghum extracellular, golgi, plasma membrane 37.56 40.77
TraesCS6A01G038300.1 Wheat plasma membrane 24.87 40.5
OQU84142 Sorghum plasma membrane 37.82 39.73
Os06t0107600-01 Rice plasma membrane 36.04 39.12
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 36.8 38.46
EER87705 Sorghum plasma membrane 35.79 38.42
TraesCS7D01G022800.1 Wheat plasma membrane 35.28 37.98
TraesCS7A01G024900.1 Wheat plasma membrane 35.28 37.87
TraesCS4A01G464100.1 Wheat plasma membrane 35.53 37.74
TraesCS7D01G082900.1 Wheat plasma membrane 34.01 37.53
TraesCS4B01G086600.1 Wheat plasma membrane 33.76 37.46
HORVU7Hr1G019700.4 Barley plasma membrane 33.76 37.25
HORVU7Hr1G002200.2 Barley plasma membrane 34.77 37.23
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 25.38 36.76
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 34.52 36.66
TraesCS7A01G020400.1 Wheat plasma membrane 34.01 36.12
Zm00001d045576_P001 Maize plasma membrane 35.79 35.52
TraesCS4A01G472400.1 Wheat plasma membrane 33.5 35.01
TraesCS4D01G164600.1 Wheat plasma membrane 24.11 34.67
Solyc01g100880.2.1 Tomato plasma membrane 31.47 34.64
TraesCS4A01G386700.1 Wheat plasma membrane 35.28 34.41
TraesCS7A01G087800.1 Wheat plasma membrane 34.52 33.75
Solyc12g035400.1.1 Tomato plasma membrane 29.19 32.76
Solyc07g015910.2.1 Tomato plasma membrane 31.47 31.55
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 58.63 31.34
HORVU5Hr1G002470.1 Barley golgi 19.8 31.33
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 20.3 30.65
Solyc11g005350.1.1 Tomato plasma membrane 28.68 30.21
Solyc12g096850.1.1 Tomato plasma membrane 26.14 29.26
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 27.16 29.08
Solyc01g100890.2.1 Tomato plasma membrane 27.41 28.72
Solyc01g100910.2.1 Tomato plasma membrane 26.4 28.42
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 27.16 28.38
GSMUA_Achr7P17540_001 Banana plasma membrane 40.86 28.2
Solyc11g005410.1.1 Tomato plasma membrane 26.9 27.97
Solyc01g104750.2.1 Tomato plasma membrane 27.66 27.95
HORVU5Hr1G067230.40 Barley mitochondrion 35.53 27.72
Solyc03g080070.2.1 Tomato plasma membrane 25.38 25.71
Os06t0109200-01 Rice plasma membrane 19.04 20.95
Zm00001d045567_P001 Maize plasma membrane 39.34 20.18
Os02t0103700-01 Rice nucleus 1.27 2.6
Protein Annotations
MapMan:24.2.1.5InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:K4AWT5PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF74SUPFAM:SSF103481
EnsemblPlantsGene:Solyc01g066850.2EnsemblPlants:Solyc01g066850.2.1TMHMM:TMhelixUniParc:UPI0002762B70InterPro:WAT1-relatedSEG:seg
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4AWT5]
Coordinates
chr1:+:75060722..75063028
Molecular Weight (calculated)
44279.1 Da
IEP (calculated)
9.712
GRAVY (calculated)
0.426
Length
394 amino acids
Sequence
(BLAST)
001: MWNFKCLISS SCLKAWDDNS IKRQIRSVDR LGNTQMKSYV VYYPIFIMLA IDFAFAISNI LLKKIIMDGM NHLVFITYRQ AISTIFLAPV AFFLEKNTRP
101: KLTPQIFCNL FLSAIVGASV TQYLFLLGME YTSATFSCAF LNMVPVVTFL MALPFRLETI NIKHGSGIAK ALGTLVCVGG AFLLTFYKGM PLVHFSDQQS
201: VSSSLKGDIS SSKLKERWIL GSLALFGGTL LWSSWFLLQT FIGKKYPCKY SSTVIMTFFS AMQSAVLTFS MDRRLSIWVP KEKIDMLSIL YAGLIGSGMC
301: YVGMSWCVKK RGPVFTAAFS PLVQVMAAIF DVPILHEQLH LGSVIGSAIV IAGLYFLLWG KNREMQKVVH ETEEKKEKEL PFKDLETNSE PRIP
Best Arabidopsis Sequence Match ( AT3G30340.1 )
(BLAST)
001: MVKFDTKLWK AVLMMSMINI GLSVVNVMFK KMIDEGLNRM VATTYRLAVG TLFLIPFAIF LERHNRPKLT GRILCSLFFS ALLGTSLVQY FFLIGLEYTS
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSGIV GSGLCYVGMS WCLRQRGAVF TSSFIPLIQV FAAIFSFSFL
301: HEQIYCGSVI GSMVIIVGLY ILLWGKSKDK SASVTKQEPL DLDIEGCGTA PKELNSTAHQ VSAK
Arabidopsis Description
WAT1-related protein At3g30340 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI65]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.