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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
PTS1:peroxisome
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g096850.1.1 Tomato plasma membrane 68.62 73.3
Solyc12g035400.1.1 Tomato plasma membrane 59.04 63.25
Solyc01g100910.2.1 Tomato plasma membrane 57.98 59.56
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 57.18 58.42
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 57.45 57.29
Solyc01g100880.2.1 Tomato plasma membrane 53.46 56.15
CDY64772 Canola plasma membrane 41.49 51.49
CDY06357 Canola plasma membrane 39.89 50.68
Bra031664.1-P Field mustard plasma membrane 48.14 49.73
KRH68417 Soybean extracellular, golgi, plasma membrane 47.87 49.18
KRG96698 Soybean extracellular, golgi, plasma membrane 47.87 49.05
KRG96712 Soybean extracellular, golgi, plasma membrane 47.87 49.05
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 48.4 48.66
CDX94976 Canola plasma membrane 49.2 48.05
Bra020026.1-P Field mustard plasma membrane 49.2 48.05
CDY69907 Canola plasma membrane 48.94 47.79
CDX94974 Canola plasma membrane 48.4 47.27
KRH33776 Soybean endoplasmic reticulum 47.34 47.21
KRG90488 Soybean plasma membrane 46.81 46.93
GSMUA_AchrUn_... Banana plasma membrane 40.43 40.53
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 39.63 39.63
Os01t0297700-01 Rice plasma membrane 39.1 38.89
TraesCSU01G213700.1 Wheat plasma membrane 33.24 38.46
Zm00001d040593_P001 Maize plasma membrane 38.56 37.08
HORVU3Hr1G040230.1 Barley plasma membrane 37.77 36.88
Zm00001d009063_P001 Maize plasma membrane 38.83 36.78
EES00623 Sorghum plasma membrane 39.1 36.75
TraesCS7A01G477400.1 Wheat plasma membrane 36.7 36.7
TraesCS7B01G379300.1 Wheat plasma membrane 36.7 36.7
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 37.5 36.62
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 37.5 36.62
TraesCS3A01G196000.1 Wheat plasma membrane 36.7 36.41
TraesCS7A01G526900.1 Wheat plasma membrane 29.79 36.36
TraesCS7D01G464900.2 Wheat plasma membrane 36.44 36.34
HORVU7Hr1G108550.2 Barley plasma membrane 36.7 36.22
TraesCS7B01G379400.1 Wheat plasma membrane 36.17 36.17
TraesCS7B01G379000.1 Wheat plasma membrane 36.7 36.13
TraesCS7D01G472200.2 Wheat plasma membrane 34.31 35.83
TraesCS7A01G477500.1 Wheat plasma membrane 35.9 35.16
TraesCS7B01G388500.1 Wheat plasma membrane 33.24 34.63
TraesCS7D01G465000.1 Wheat plasma membrane 34.57 33.51
Solyc11g005350.1.1 Tomato plasma membrane 32.71 32.89
Solyc11g005410.1.1 Tomato plasma membrane 32.98 32.72
Solyc01g104750.2.1 Tomato plasma membrane 33.78 32.56
Solyc12g099580.1.1 Tomato plasma membrane 30.59 31.94
Solyc07g015910.2.1 Tomato plasma membrane 32.18 30.79
Solyc04g007590.1.1 Tomato nucleus 27.66 29.97
Solyc01g066850.2.1 Tomato plasma membrane 28.72 27.41
Solyc03g080070.2.1 Tomato plasma membrane 26.33 25.45
Protein Annotations
MapMan:24.2.1.5ncoils:CoilInterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085UniProt:K4B1C0EMBL:LK056925PFAM:PF00892PANTHER:PTHR31218
PANTHER:PTHR31218:SF11SUPFAM:SSF103481SignalP:SignalP-noTMEnsemblPlantsGene:Solyc01g100890.2EnsemblPlants:Solyc01g100890.2.1TMHMM:TMhelix
UniParc:UPI00027678B6InterPro:WAT1-related::::
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4B1C0]
Coordinates
chr1:+:90784520..90788017
Molecular Weight (calculated)
42048.5 Da
IEP (calculated)
9.901
GRAVY (calculated)
0.419
Length
376 amino acids
Sequence
(BLAST)
001: MGKNLFPFFL MVLVQLGSAG TAIISKIVMD DGMNPYVHLS YRQIIATISI APFAYFFERE TRPKLTPSTL FLIFLCSIFG VTGMQTTYLI GLKNSTATIT
101: TALANLVPAI TFLLAVLSGL EKVVLRSKGG QAKVMGTMLC ICGAMLLSLY HGKMLIGQLK IHWKYSQHHT SKNIIHDPNN NTHGNFFLGP FLVIISCIVY
201: SLWLIIQPRV NERYAAPYTS TTLMCFMASL ECTIIALCVN NHDKNAWSLN PIRAISVLYN GIISSALAFY LITWCIKRKG PLYVSVFLPL LLVISSFLSW
301: ALLGEKLYIG TIVGSMLTVI GLYGFLWGKK KEMERIKKET EEKVFNTKKN QLTKIDLDLQ LSENSKHSFT NAQSKI
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.