Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400010825 Potato plasma membrane 93.73 93.2
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 71.51 68.21
Solyc01g100910.2.1 Tomato plasma membrane 68.66 65.85
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 70.66 65.78
Solyc12g096850.1.1 Tomato plasma membrane 61.82 61.65
Solyc01g100880.2.1 Tomato plasma membrane 60.4 59.22
Solyc01g100890.2.1 Tomato plasma membrane 63.25 59.04
Bra031664.1-P Field mustard plasma membrane 49.86 48.08
KRH68417 Soybean extracellular, golgi, plasma membrane 49.57 47.54
KRG96712 Soybean extracellular, golgi, plasma membrane 49.57 47.41
KRG96698 Soybean extracellular, golgi, plasma membrane 49.57 47.41
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 50.43 47.33
CDY64772 Canola plasma membrane 40.74 47.19
Bra020026.1-P Field mustard plasma membrane 51.28 46.75
CDX94976 Canola plasma membrane 51.28 46.75
CDY69907 Canola plasma membrane 51.0 46.49
KRG90488 Soybean plasma membrane 49.57 46.4
CDY06357 Canola plasma membrane 39.03 46.28
CDX94974 Canola plasma membrane 50.43 45.97
KRH33776 Soybean endoplasmic reticulum 49.29 45.89
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 44.44 41.49
GSMUA_AchrUn_... Banana plasma membrane 44.16 41.33
Os01t0297700-01 Rice plasma membrane 43.02 39.95
TraesCS7A01G526900.1 Wheat plasma membrane 34.47 39.29
TraesCSU01G213700.1 Wheat plasma membrane 35.04 37.85
HORVU3Hr1G040230.1 Barley plasma membrane 41.31 37.66
Zm00001d009063_P001 Maize plasma membrane 42.45 37.53
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 41.03 37.4
Zm00001d040593_P001 Maize plasma membrane 41.6 37.34
TraesCS3A01G196000.1 Wheat plasma membrane 40.17 37.2
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 40.74 37.14
EES00623 Sorghum plasma membrane 41.88 36.75
TraesCS7B01G379000.1 Wheat plasma membrane 39.32 36.13
HORVU7Hr1G108550.2 Barley plasma membrane 39.03 35.96
TraesCS7B01G379300.1 Wheat plasma membrane 38.46 35.9
TraesCS7A01G477400.1 Wheat plasma membrane 38.18 35.64
TraesCS7B01G379400.1 Wheat plasma membrane 38.18 35.64
TraesCS7D01G472200.2 Wheat plasma membrane 36.47 35.56
TraesCS7D01G464900.2 Wheat plasma membrane 37.89 35.28
Solyc12g099580.1.1 Tomato plasma membrane 35.9 35.0
TraesCS7A01G477500.1 Wheat plasma membrane 37.04 33.85
Solyc01g104750.2.1 Tomato plasma membrane 37.61 33.85
TraesCS7B01G388500.1 Wheat plasma membrane 34.76 33.8
TraesCS7D01G465000.1 Wheat plasma membrane 37.04 33.51
Solyc04g007590.1.1 Tomato nucleus 32.76 33.14
Solyc11g005350.1.1 Tomato plasma membrane 34.76 32.62
Solyc11g005410.1.1 Tomato plasma membrane 33.9 31.4
Solyc07g015910.2.1 Tomato plasma membrane 34.76 31.04
Solyc01g066850.2.1 Tomato plasma membrane 32.76 29.19
Solyc03g080070.2.1 Tomato plasma membrane 30.2 27.25
Protein Annotations
MapMan:24.2.1.5ncoils:CoilInterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085UniProt:K4DE01PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF11
SUPFAM:SSF103481EnsemblPlantsGene:Solyc12g035400.1EnsemblPlants:Solyc12g035400.1.1TMHMM:TMhelixUniParc:UPI0002769E70InterPro:WAT1-related
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4DE01]
Coordinates
chr12:-:58636304..58641563
Molecular Weight (calculated)
39115.7 Da
IEP (calculated)
8.921
GRAVY (calculated)
0.578
Length
351 amino acids
Sequence
(BLAST)
001: MKKKGSDLLP FIAMVIVQVG YAGSNVVTKL VMDTGMHPFV QTAYRPIFAT ISIAPFAYFL ERKTRPKLTL SVFFQIFLCS IIGVTANQYT FCIGLKYTTP
101: TIVSALDNLI PAFTFLLAIL FGLEKLGLKS LAGQAKLIGT IVCVGGAMLL SLYRGPVLIG QLGFHWKYAE NTTNDKDINS THTNFILGPF ILIISSITYA
201: LWLTIQARVN EKYAAPYSST LLMFFMASFQ CMIISFCVVP KAYEWALNPI RAISVVYNGT VCSSLALYLS SWCIERKGPL YVSMFNPLLL VIAAFLSWIL
301: LREKLYLGIV VGSILTVVGL YGFLWGQKKE MEQSKNEIEE EDNKADLELQ L
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.