Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 3
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077027 | Potato | plasma membrane | 66.92 | 90.07 |
| Solyc11g005350.1.1 | Tomato | plasma membrane | 41.98 | 44.12 |
| Solyc01g104750.2.1 | Tomato | plasma membrane | 43.51 | 43.85 |
| Bra033954.1-P | Field mustard | golgi, plasma membrane, vacuole | 29.52 | 41.73 |
| CDY12698 | Canola | plasma membrane | 39.19 | 40.53 |
| CDX81497 | Canola | plasma membrane | 38.93 | 40.16 |
| CDY42121 | Canola | plasma membrane | 35.11 | 40.12 |
| Solyc11g005410.1.1 | Tomato | plasma membrane | 38.17 | 39.58 |
| Bra024767.1-P | Field mustard | plasma membrane | 36.64 | 39.56 |
| AT1G68170.2 | Thale cress | plasma membrane | 36.64 | 39.34 |
| CDY64463 | Canola | plasma membrane | 12.47 | 38.58 |
| Bra012488.1-P | Field mustard | plasma membrane | 28.5 | 38.36 |
| AT1G25270.1 | Thale cress | plasma membrane | 34.61 | 38.31 |
| CDY59354 | Canola | plasma membrane | 37.15 | 38.22 |
| CDY64689 | Canola | plasma membrane | 33.08 | 37.57 |
| CDY24356 | Canola | plasma membrane | 33.84 | 36.64 |
| Bra002077.1-P | Field mustard | plasma membrane | 33.84 | 36.64 |
| CDY62464 | Canola | plasma membrane | 34.1 | 36.31 |
| Solyc01g100880.2.1 | Tomato | plasma membrane | 32.32 | 35.47 |
| Solyc12g099580.1.1 | Tomato | plasma membrane | 32.32 | 35.28 |
| Solyc12g035400.1.1 | Tomato | plasma membrane | 31.04 | 34.76 |
| Solyc12g096850.1.1 | Tomato | plasma membrane | 30.79 | 34.38 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 20.36 | 32.79 |
| Solyc01g100890.2.1 | Tomato | plasma membrane | 30.79 | 32.18 |
| Solyc01g100910.2.1 | Tomato | plasma membrane | 29.77 | 31.97 |
| Solyc01g100920.2.1 | Tomato | golgi, plasma membrane, vacuole | 30.28 | 31.57 |
| Solyc01g066850.2.1 | Tomato | plasma membrane | 31.55 | 31.47 |
| Solyc04g007590.1.1 | Tomato | nucleus | 27.48 | 31.12 |
| Solyc01g100900.2.1 | Tomato | golgi, plasma membrane, vacuole | 29.01 | 30.98 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 29.77 | 30.08 |
Protein Annotations
| EnsemblPlants:Solyc07g015910.2.1 | EnsemblPlantsGene:Solyc07g015910.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | PFAM:PF00892 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000276BBEC | UniProt:K4CCA8 | MapMan:24.2.1.5 | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4CCA8]
Coordinates
chr7:+:5698053..5705955
Molecular Weight (calculated)
43135.1 Da
IEP (calculated)
9.692
GRAVY (calculated)
0.580
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKICDKVHG LKPIIMMVFI QIGYAGMTLL YKLASNDGMS LRILIAYRFL FASATVLPLA LYFDRKSRPK MTWMVMLLAF LSALFGGSMP QNLFAASLVL
101: TSATFATATL NLIPGITFII ATFFRLEKLD LKTREGKAKV LGTLIGIGGA MLLTFYKGLE IKTWSIKLDL KGHVAASHQI QKPYAHILGP ILAICSCFSS
201: AVSLIFQAKM SELYPCHFSS TALMSIMGAL QAGVYAISTE RDWTQWKLGW NLRLFAVLYA GVVASGLAII FLMFCVRMRG PLFVSIFSPL MLVCVAIAGS
301: LFLNEKLHLG SVLGGAIIIC GLYLVLWGKK QEIRRTSKLT PSINCEESDQ EDPIVPSNVI GVAPNFHALN EIVQLSSQQV QKDKESIDLD SKV
101: TSATFATATL NLIPGITFII ATFFRLEKLD LKTREGKAKV LGTLIGIGGA MLLTFYKGLE IKTWSIKLDL KGHVAASHQI QKPYAHILGP ILAICSCFSS
201: AVSLIFQAKM SELYPCHFSS TALMSIMGAL QAGVYAISTE RDWTQWKLGW NLRLFAVLYA GVVASGLAII FLMFCVRMRG PLFVSIFSPL MLVCVAIAGS
301: LFLNEKLHLG SVLGGAIIIC GLYLVLWGKK QEIRRTSKLT PSINCEESDQ EDPIVPSNVI GVAPNFHALN EIVQLSSQQV QKDKESIDLD SKV
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.