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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 85.25 84.78
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 81.42 79.05
Solyc12g035400.1.1 Tomato plasma membrane 65.85 68.66
Solyc12g096850.1.1 Tomato plasma membrane 57.65 59.94
Solyc01g100890.2.1 Tomato plasma membrane 59.56 57.98
Solyc01g100880.2.1 Tomato plasma membrane 53.83 55.03
CDY64772 Canola plasma membrane 40.16 48.51
CDY06357 Canola plasma membrane 38.8 47.97
Bra031664.1-P Field mustard plasma membrane 47.27 47.53
KRG96712 Soybean extracellular, golgi, plasma membrane 46.45 46.32
KRG96698 Soybean extracellular, golgi, plasma membrane 46.45 46.32
KRH68417 Soybean extracellular, golgi, plasma membrane 45.9 45.9
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 46.72 45.72
Bra020026.1-P Field mustard plasma membrane 48.09 45.71
CDX94976 Canola plasma membrane 48.09 45.71
CDY69907 Canola plasma membrane 47.81 45.45
CDX94974 Canola plasma membrane 47.27 44.94
KRH33776 Soybean endoplasmic reticulum 46.17 44.83
KRG90488 Soybean plasma membrane 45.63 44.53
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 43.72 42.55
Os01t0297700-01 Rice plasma membrane 42.35 41.01
GSMUA_AchrUn_... Banana plasma membrane 41.26 40.27
TraesCS3A01G196000.1 Wheat plasma membrane 39.89 38.52
HORVU3Hr1G040230.1 Barley plasma membrane 40.44 38.44
Zm00001d040593_P001 Maize plasma membrane 40.98 38.36
TraesCS7A01G526900.1 Wheat plasma membrane 32.24 38.31
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 40.16 38.18
TraesCSU01G213700.1 Wheat plasma membrane 33.88 38.15
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 39.89 37.92
Zm00001d009063_P001 Maize plasma membrane 40.98 37.78
EES00623 Sorghum plasma membrane 41.26 37.75
TraesCS7D01G472200.2 Wheat plasma membrane 36.07 36.67
TraesCS7A01G477400.1 Wheat plasma membrane 37.43 36.44
TraesCS7B01G379300.1 Wheat plasma membrane 37.43 36.44
TraesCS7B01G379400.1 Wheat plasma membrane 36.89 35.9
TraesCS7D01G464900.2 Wheat plasma membrane 36.89 35.81
TraesCS7B01G388500.1 Wheat plasma membrane 34.97 35.46
HORVU7Hr1G108550.2 Barley plasma membrane 36.89 35.43
TraesCS7B01G379000.1 Wheat plasma membrane 36.89 35.34
TraesCS7A01G477500.1 Wheat plasma membrane 36.61 34.9
TraesCS7D01G465000.1 Wheat plasma membrane 35.25 33.25
Solyc01g104750.2.1 Tomato plasma membrane 34.7 32.56
Solyc11g005350.1.1 Tomato plasma membrane 32.24 31.55
Solyc12g099580.1.1 Tomato plasma membrane 30.6 31.11
Solyc11g005410.1.1 Tomato plasma membrane 30.87 29.82
Solyc07g015910.2.1 Tomato plasma membrane 31.97 29.77
Solyc04g007590.1.1 Tomato nucleus 27.87 29.39
Solyc01g066850.2.1 Tomato plasma membrane 28.42 26.4
Solyc03g080070.2.1 Tomato plasma membrane 27.87 26.22
Protein Annotations
EnsemblPlants:Solyc01g100910.2.1EnsemblPlantsGene:Solyc01g100910.2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF11PFAM:PF00892
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI00027678B8UniProt:K4B1C2MapMan:24.2.1.5:
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4B1C2]
Coordinates
chr1:+:90807486..90809932
Molecular Weight (calculated)
40431.6 Da
IEP (calculated)
9.431
GRAVY (calculated)
0.675
Length
366 amino acids
Sequence
(BLAST)
001: MGKELLAFVV MVIVQLGFAG MIIISKLVMD GGMNPFVQSA YRPIFATISI APFAFYFERK NKSKLTIFVL FQIFLCSIFG ITANQYAWFI GLTNSTPTIA
101: SAIDNLIPAF TFIIAVPLGI EKLGLRSIAG QAKFWGTIVC VGGAMLLSLY HGKVVIGQLG FHWKLAENTG KDVNSAHSNF FLGPFLLIVC SLTYAIWLII
201: QTKLNEKYAA PYTCITLMCC MASVESVIIG FCVVPKLSEW KLNPIRAISV VYNGAVSTSL VFFLSSWCIE KKGPLYVSMF NPLLLVISAF LSWTLLREKL
301: YLGVVVGSMI VVAGLYGFLW GKKMEDIKVN KEKMNQLSKS IDLELQLPNS NDQISSSELA KAKLQI
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.