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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400007108 Potato plasma membrane 92.46 98.51
Solyc12g035400.1.1 Tomato plasma membrane 59.22 60.4
Solyc12g096850.1.1 Tomato plasma membrane 54.75 55.68
Bra031664.1-P Field mustard plasma membrane 55.31 54.4
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 56.7 54.28
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 56.98 54.11
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 55.59 54.08
Solyc01g100910.2.1 Tomato plasma membrane 55.03 53.83
Solyc01g100890.2.1 Tomato plasma membrane 56.15 53.46
CDY64772 Canola plasma membrane 44.69 52.81
CDY06357 Canola plasma membrane 43.3 52.36
Bra020026.1-P Field mustard plasma membrane 55.87 51.95
CDX94974 Canola plasma membrane 55.87 51.95
CDX94976 Canola plasma membrane 55.87 51.95
KRG96698 Soybean extracellular, golgi, plasma membrane 53.07 51.77
KRG96712 Soybean extracellular, golgi, plasma membrane 53.07 51.77
CDY69907 Canola plasma membrane 55.59 51.69
KRH68417 Soybean extracellular, golgi, plasma membrane 52.79 51.64
KRG90488 Soybean plasma membrane 53.91 51.47
KRH33776 Soybean endoplasmic reticulum 53.91 51.19
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 49.72 47.34
GSMUA_AchrUn_... Banana plasma membrane 47.49 45.33
Os01t0297700-01 Rice plasma membrane 46.09 43.65
TraesCSU01G213700.1 Wheat plasma membrane 38.83 42.77
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 45.53 42.34
HORVU3Hr1G040230.1 Barley plasma membrane 45.25 42.08
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 44.97 41.82
TraesCS7B01G379300.1 Wheat plasma membrane 43.3 41.22
TraesCS7A01G477400.1 Wheat plasma membrane 43.02 40.96
Zm00001d040593_P001 Maize plasma membrane 44.69 40.92
TraesCS7B01G379400.1 Wheat plasma membrane 42.74 40.69
HORVU7Hr1G108550.2 Barley plasma membrane 43.3 40.68
TraesCS3A01G196000.1 Wheat plasma membrane 43.02 40.63
TraesCS7D01G464900.2 Wheat plasma membrane 42.74 40.58
Zm00001d009063_P001 Maize plasma membrane 44.97 40.55
EES00623 Sorghum plasma membrane 44.97 40.25
TraesCS7A01G477500.1 Wheat plasma membrane 42.46 39.58
TraesCS7B01G379000.1 Wheat plasma membrane 41.62 39.01
TraesCS7A01G526900.1 Wheat plasma membrane 33.24 38.64
TraesCS7D01G465000.1 Wheat plasma membrane 41.06 37.89
TraesCS7D01G472200.2 Wheat plasma membrane 36.87 36.67
TraesCS7B01G388500.1 Wheat plasma membrane 34.92 34.63
Solyc01g104750.2.1 Tomato plasma membrane 37.71 34.62
Solyc11g005350.1.1 Tomato plasma membrane 34.92 33.42
Solyc12g099580.1.1 Tomato plasma membrane 33.52 33.33
Solyc11g005410.1.1 Tomato plasma membrane 35.2 33.25
Solyc07g015910.2.1 Tomato plasma membrane 35.47 32.32
Solyc01g066850.2.1 Tomato plasma membrane 34.64 31.47
Solyc04g007590.1.1 Tomato nucleus 30.45 31.41
Solyc03g080070.2.1 Tomato plasma membrane 30.45 28.02
Protein Annotations
MapMan:24.2.1.5InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:K4B1B9PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF11SUPFAM:SSF103481
EnsemblPlantsGene:Solyc01g100880.2EnsemblPlants:Solyc01g100880.2.1TMHMM:TMhelixUniParc:UPI00027678B5InterPro:WAT1-relatedSEG:seg
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4B1B9]
Coordinates
chr1:-:90775475..90777741
Molecular Weight (calculated)
39516.2 Da
IEP (calculated)
7.943
GRAVY (calculated)
0.578
Length
358 amino acids
Sequence
(BLAST)
001: MGNDLLPLLT MVIVQLGYAG MNIISKLAMD SGMNPFVHVA YRQIFATIAI APFAYFLERK TRPKLTPSIL FQIFLCSIFG VSMNQITYFV GLKNTTPTIS
101: CALSNLTPAV TFLLAIPFGL ERVGLGSKAG QAKMLGTILC VGGAMLLSFY HGSIVPIDQP NIHWKYAQDM TQNKSTTTHE NFILGPFLLI ISAVSWGIWS
201: ILQAKLSMVY AAPYSSSALM CLMASFQCVI VGICFDHNIS DWSLSHSIRA VSSIYSGVVC TALAYCLMSW CIERKGPLYV SVFNPLLLVI VAILSWGVLQ
301: EKIYIGTVIG SILIVLGLYG VLWGKNNELK LLPIEFDEEI GDIEKEKQKK DMEMQLQH
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.