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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 7
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g100880.2.1 Tomato plasma membrane 98.51 92.46
PGSC0003DMT400010825 Potato plasma membrane 58.33 55.52
Bra031664.1-P Field mustard plasma membrane 55.65 51.37
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 56.85 51.07
KRG96712 Soybean extracellular, golgi, plasma membrane 55.36 50.68
KRG96698 Soybean extracellular, golgi, plasma membrane 55.36 50.68
KRH68417 Soybean extracellular, golgi, plasma membrane 55.06 50.55
CDY06357 Canola plasma membrane 44.35 50.34
CDY64772 Canola plasma membrane 44.35 49.17
KRG90488 Soybean plasma membrane 54.46 48.8
Bra020026.1-P Field mustard plasma membrane 55.65 48.57
CDX94976 Canola plasma membrane 55.65 48.57
CDX94974 Canola plasma membrane 55.65 48.57
CDY69907 Canola plasma membrane 55.36 48.31
KRH33776 Soybean endoplasmic reticulum 53.87 48.01
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 49.7 44.41
PGSC0003DMT400075201 Potato mitochondrion 23.21 43.58
GSMUA_AchrUn_... Banana plasma membrane 48.21 43.2
Os01t0297700-01 Rice plasma membrane 46.13 41.01
TraesCSU01G213700.1 Wheat plasma membrane 38.69 40.0
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 45.83 40.0
HORVU3Hr1G040230.1 Barley plasma membrane 45.54 39.74
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 45.24 39.48
Zm00001d040593_P001 Maize plasma membrane 45.54 39.13
TraesCS7B01G379300.1 Wheat plasma membrane 43.15 38.56
TraesCS7A01G477400.1 Wheat plasma membrane 42.86 38.3
TraesCS3A01G196000.1 Wheat plasma membrane 43.15 38.26
EES00623 Sorghum plasma membrane 45.54 38.25
TraesCS7B01G379400.1 Wheat plasma membrane 42.56 38.03
TraesCS7D01G464900.2 Wheat plasma membrane 42.56 37.93
Zm00001d009063_P001 Maize plasma membrane 44.64 37.78
HORVU7Hr1G108550.2 Barley plasma membrane 42.56 37.53
TraesCS7A01G526900.1 Wheat plasma membrane 33.93 37.01
TraesCS7A01G477500.1 Wheat plasma membrane 42.26 36.98
TraesCS7B01G379000.1 Wheat plasma membrane 41.07 36.13
TraesCS7D01G465000.1 Wheat plasma membrane 40.77 35.31
TraesCS7D01G472200.2 Wheat plasma membrane 37.5 35.0
PGSC0003DMT400077027 Potato plasma membrane 28.87 33.22
TraesCS7B01G388500.1 Wheat plasma membrane 35.42 32.96
PGSC0003DMT400010115 Potato golgi, plasma membrane, vacuole 34.23 32.95
PGSC0003DMT400076507 Potato plasma membrane 36.9 31.79
PGSC0003DMT400029440 Potato plasma membrane 22.02 31.09
PGSC0003DMT400011804 Potato plasma membrane 31.85 29.72
PGSC0003DMT400015286 Potato plasma membrane 28.87 26.36
PGSC0003DMT400001491 Potato golgi, plasma membrane, plastid 23.21 25.66
PGSC0003DMT400010175 Potato golgi 24.4 19.76
Protein Annotations
EnsemblPlants:PGSC0003DMT400007108EnsemblPlantsGene:PGSC0003DMG400002752GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF11PFAM:PF00892PGSC:PGSC0003DMG400002752SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002951ED1UniProt:M0ZSH2MapMan:24.2.1.5:
Description
Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400002752]
Coordinates
chr1:-:78471566..78473739
Molecular Weight (calculated)
36958.9 Da
IEP (calculated)
7.436
GRAVY (calculated)
0.569
Length
336 amino acids
Sequence
(BLAST)
001: MGNDLLPFLT MVIVQLGYAG MNIISKLAMD SGMNPFVHVA YRQIFATIAI APFAYFLERV SMNQITYFVG LKNTTPTISC ALSNLTPAVT FLLAIPFGLE
101: RVGLGSKAGQ AKMLGTILCV GGAMLLSFYH GSIVPIDQPN IHWKYAQDMT QNKSTTSHGN FILGPFLLII SAVSWGIWSI LQAKLSMVYA APYSSSALMC
201: LMASFQCVIV GICFDHNISD WSLSHSIRAV SSIYSGVVCT ALAYCLMSWC IERKGPLYVS VFNPLLLVIV AILSWGLLQE KIYIGTVVGS ILIVLGLYGV
301: LWGKNNELKL PIEFDEEIGD IEKEKQKKDM EMQLQH
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.