Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- golgi 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g005410.1.1 | Tomato | plasma membrane | 93.7 | 86.28 |
| VIT_04s0044g00480.t01 | Wine grape | mitochondrion | 33.24 | 44.79 |
| VIT_04s0044g00460.t01 | Wine grape | plasma membrane | 39.26 | 43.08 |
| PGSC0003DMT400077027 | Potato | plasma membrane | 32.09 | 38.36 |
| PGSC0003DMT400076507 | Potato | plasma membrane | 40.11 | 35.9 |
| PGSC0003DMT400007108 | Potato | plasma membrane | 32.95 | 34.23 |
| PGSC0003DMT400010825 | Potato | plasma membrane | 31.23 | 30.88 |
| PGSC0003DMT400011804 | Potato | plasma membrane | 30.66 | 29.72 |
| PGSC0003DMT400029440 | Potato | plasma membrane | 19.2 | 28.15 |
| PGSC0003DMT400015286 | Potato | plasma membrane | 29.51 | 27.99 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 22.64 | 25.99 |
| PGSC0003DMT400075201 | Potato | mitochondrion | 11.46 | 22.35 |
| PGSC0003DMT400010175 | Potato | golgi | 25.79 | 21.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400010115 | EnsemblPlantsGene:PGSC0003DMG400003966 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | PFAM:PF00892 | PGSC:PGSC0003DMG400003966 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002969223 | UniProt:M0ZXI4 | MapMan:24.2.1.5 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400003966]
Coordinates
chr11:-:7598078..7600005
Molecular Weight (calculated)
37865.7 Da
IEP (calculated)
8.791
GRAVY (calculated)
0.566
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSQIASGS VNIFYKVAVA DGMKVQIMVF YRLFFATAFM VPLAFIMERA ALGSNLYAES LIFTTATFSS AMSNLTPAVT LIMAVLVGME RLDMHRLAGQ
101: AKLFGTLLGI GGALILNLYK GIKIPLPSMN IHLLHTSNAT ETTAQQATYN DIWGSILAFL SCASYASWLI FQGRMRQRYP MYSNTALMCF CGAIQAGIYA
201: FIRERDSSAW KLGWNIRLFT PAYSGIVSSG LGVTVVAWCT KQKGPLYVSS FYPLALIFVA IVGTIVLPEE LHLGSLIGSV FIVIGLYVML WGTAKEKTVA
301: AAEALKRNDN GVIEIISYAG INQATAAVVP EFKTDDIISP SSTAAHQEP
101: AKLFGTLLGI GGALILNLYK GIKIPLPSMN IHLLHTSNAT ETTAQQATYN DIWGSILAFL SCASYASWLI FQGRMRQRYP MYSNTALMCF CGAIQAGIYA
201: FIRERDSSAW KLGWNIRLFT PAYSGIVSSG LGVTVVAWCT KQKGPLYVSS FYPLALIFVA IVGTIVLPEE LHLGSLIGSV FIVIGLYVML WGTAKEKTVA
301: AAEALKRNDN GVIEIISYAG INQATAAVVP EFKTDDIISP SSTAAHQEP
001: MERICEMWRE MKDITAMVVV QIATAGLNIF FKLAMEDGMN PSVLVAYRLL FATLFMIPIC FIFQRKKRPE FTCRLMLLAL LSGLLGVVIP SILTITGLAL
101: TSATFTSAAG VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS
201: ISLWFLLQVK ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG
301: SFLLDETLHL GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP
101: TSATFTSAAG VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS
201: ISLWFLLQVK ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG
301: SFLLDETLHL GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP
Arabidopsis Description
nodulin MtN21 /EamA-like transporter family protein [Source:TAIR;Acc:AT1G68170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.