Factsheet for VIT_04s0044g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	23.27	56.49
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	54.09	55.84
VIT_04s0044g00480.t01	Wine grape	mitochondrion	43.08	52.9
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	24.21	48.43
VIT_04s0044g00410.t01	Wine grape	plasma membrane	56.6	45.92
VIT_04s0044g00420.t01	Wine grape	plastid	52.83	43.19
VIT_04s0044g00360.t01	Wine grape	plasma membrane	43.4	43.12
VIT_04s0044g00390.t01	Wine grape	plasma membrane	56.29	41.82
Solyc11g005410.1.1	Tomato	plasma membrane	49.06	41.16
PGSC0003DMT400010115	Potato	golgi, plasma membrane, vacuole	43.08	39.26
VIT_04s0044g00380.t01	Wine grape	plasma membrane	53.14	38.58
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	36.48	31.52
VIT_01s0010g03480.t01	Wine grape	plasma membrane	34.28	30.11
VIT_01s0010g03450.t01	Wine grape	plasma membrane	33.96	29.83
VIT_11s0052g00570.t01	Wine grape	extracellular	5.35	21.25

Protein Annotations

MapMan:24.2.1.5	ProteinID:CBI37611	ProteinID:CBI37611.3	UniProt:D7U435	InterPro:EamA_dom	EMBL:FN596506
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF7	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE4E54	ArrayExpress:VIT_04s0044g00460
EnsemblPlantsGene:VIT_04s0044g00460	EnsemblPlants:VIT_04s0044g00460.t01	InterPro:WAT1-related	SEG:seg	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7U435]

Coordinates

chr4:+:21234508..21237843

Molecular Weight (calculated)

34892.7 Da

IEP (calculated)

9.835

GRAVY (calculated)

0.646

Length

318 amino acids

Sequence
(BLAST)

001: MGGKLCNIVD GTKPVIVMVA VQLVFGGVNI LYKLAINDGM NTRVLVAYRF IFATAFISPL AFILERKSSP RLTWMIALQG FLCGLFGGAL GQNLYLESLA
101: LTSPTFSAAM VNLIPAVTFI FAISLGLEKL AIRTWAGKAK VGGTLLGIGG AMVLTFYKGP QINIWSTKLF LLCNLVDNPL HIFSNAPKVP SYKFIDPISP
201: LECEQAKMGE RYPYQYSSTA LMCAAATVQA IVYATCMEGN WSTWKLGWNI RLLTVAYTGF LASGFMVTLI TWCIRKRGPL FVSIFNPLML VFVAILGSLI
301: LDEKLHLGRS PLRSPFYL

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.