Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0044g00350.t01 | Wine grape | extracellular, golgi, vacuole | 33.33 | 40.46 |
| VIT_04s0044g00370.t01 | Wine grape | extracellular, golgi | 68.55 | 35.39 |
| VIT_04s0044g00360.t01 | Wine grape | plasma membrane | 66.04 | 32.81 |
| VIT_04s0044g00480.t01 | Wine grape | mitochondrion | 49.06 | 30.12 |
| VIT_04s0044g00410.t01 | Wine grape | plasma membrane | 69.18 | 28.06 |
| VIT_04s0044g00420.t01 | Wine grape | plastid | 65.41 | 26.74 |
| VIT_04s0044g00390.t01 | Wine grape | plasma membrane | 68.55 | 25.47 |
| VIT_04s0044g00460.t01 | Wine grape | plasma membrane | 48.43 | 24.21 |
| VIT_04s0044g00380.t01 | Wine grape | plasma membrane | 64.78 | 23.52 |
| VIT_02s0025g03180.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 34.59 | 14.95 |
| VIT_01s0010g03480.t01 | Wine grape | plasma membrane | 30.19 | 13.26 |
| VIT_01s0010g03450.t01 | Wine grape | plasma membrane | 29.56 | 12.98 |
| VIT_11s0052g00570.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.5 | ProteinID:CCB60459 | ProteinID:CCB60459.1 | UniProt:F6I0J3 | EMBL:FN596506 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 |
| TMHMM:TMhelix | UniParc:UPI000210A7D4 | ArrayExpress:VIT_04s0044g00430 | EnsemblPlantsGene:VIT_04s0044g00430 | EnsemblPlants:VIT_04s0044g00430.t01 | InterPro:WAT1-related |
Description
No Description!
Coordinates
chr4:+:21178903..21179991
Molecular Weight (calculated)
17673.0 Da
IEP (calculated)
9.774
GRAVY (calculated)
0.459
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNLIPAMTF VMAIILRMES LSIKTNIGKA KVLGTILSIA GAMVLTFYKG REIKLWSTNI NLLHQDHHDM SEQSSRNQAL GGFLGVASAV SMAVWMILQA
101: KLSMEYPPYS ATALMSLCAS IQSVVYALCT ERHWSAWKLG WNVRLLTVVY GVRCFLQIS
101: KLSMEYPPYS ATALMSLCAS IQSVVYALCT ERHWSAWKLG WNVRLLTVVY GVRCFLQIS
001: MKDITAMVVV QIATAGLNIF FKLAMEDGMN PSVLVAYRLL FATLFMIPIC FIFQRKKRPE FTCRLMLLAL LSGLLGVVIP SILTITGLAL TSATFTSAAG
101: VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS ISLWFLLQVK
201: ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG SFLLDETLHL
301: GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP
101: VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS ISLWFLLQVK
201: ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG SFLLDETLHL
301: GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP
Arabidopsis Description
nodulin MtN21 /EamA-like transporter family protein [Source:TAIR;Acc:AT1G68170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.