Factsheet for VIT_04s0044g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 3
golgi 3
plasma membrane 3
extracellular 3
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	40.58	95.42
VIT_04s0044g00410.t01	Wine grape	plasma membrane	99.03	77.81
VIT_04s0044g00390.t01	Wine grape	plasma membrane	98.7	71.03
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	35.39	68.55
VIT_04s0044g00360.t01	Wine grape	plasma membrane	63.64	61.25
VIT_04s0044g00420.t01	Wine grape	plastid	75.65	59.9
VIT_04s0044g00460.t01	Wine grape	plasma membrane	55.84	54.09
VIT_04s0044g00380.t01	Wine grape	plasma membrane	75.65	53.2
VIT_04s0044g00480.t01	Wine grape	mitochondrion	39.94	47.49
VIT_11s0052g00570.t01	Wine grape	extracellular	8.12	31.25
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	35.71	29.89
VIT_01s0010g03480.t01	Wine grape	plasma membrane	32.79	27.9
VIT_01s0010g03450.t01	Wine grape	plasma membrane	32.47	27.62

Protein Annotations

EntrezGene:100243679	wikigene:100243679	MapMan:24.2.1.5	ProteinID:CBI37619	ProteinID:CBI37619.3	UniProt:D7U443
InterPro:EamA_dom	EMBL:FN596506	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100243679	wikigene:LOC100243679	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF7
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE4EB1	ArrayExpress:VIT_04s0044g00370	EnsemblPlantsGene:VIT_04s0044g00370	EnsemblPlants:VIT_04s0044g00370.t01
InterPro:WAT1-related	RefSeq:XP_002271731	RefSeq:XP_002271731.2	RefSeq:XP_003631921	RefSeq:XP_003631921.1	SEG:seg

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7U443]

Coordinates

chr4:+:21096321..21098453

Molecular Weight (calculated)

33416.5 Da

IEP (calculated)

9.386

GRAVY (calculated)

0.933

Length

308 amino acids

Sequence
(BLAST)

001: MVVVQIIFGG LNIMYKLARN DGMSMKILVA YRNIFATAIM VPLALIFEGK SRPKLTWMIF LQGSLCGLFG GSLGQNLYAE SLSLTSATFV AAMTNLVPAM
101: TFVMAVFLRM ERLAIGTIAG KAKLMGTIMS LGGAMILTFY KGVEIKLWST NINLLHHGAA ALQESSPNQV LGSLLAVASC VCIAVWLIVQ TKMSMVYPSY
201: SGTDLMCVCA SIQSVVYAMC TERDWSAWKL GWDIRLLTVV YSGVLASGLM VTLMTWVSRM RGPLFVSSFF PLMLATVAIL GSLLLHEQLH IGSIIAAVLI
301: IVGLYIVL

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.