Factsheet for VIT_04s0044g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	77.81	99.03
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	31.89	95.42
VIT_04s0044g00390.t01	Wine grape	plasma membrane	98.98	90.65
VIT_04s0044g00360.t01	Wine grape	plasma membrane	60.2	73.75
VIT_04s0044g00420.t01	Wine grape	plastid	68.88	69.41
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	28.06	69.18
VIT_04s0044g00380.t01	Wine grape	plasma membrane	68.88	61.64
VIT_04s0044g00460.t01	Wine grape	plasma membrane	45.92	56.6
VIT_04s0044g00480.t01	Wine grape	mitochondrion	34.44	52.12
VIT_11s0052g00570.t01	Wine grape	extracellular	7.14	35.0
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	29.85	31.79
VIT_01s0010g03450.t01	Wine grape	plasma membrane	28.06	30.39
VIT_01s0010g03480.t01	Wine grape	plasma membrane	28.06	30.39

Protein Annotations

EntrezGene:100264216	wikigene:100264216	EntrezGene:100267720	wikigene:100267720	MapMan:24.2.1.5	ProteinID:CBI37615
ProteinID:CBI37615.3	UniProt:D7U439	InterPro:EamA_dom	EMBL:FN596506	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100264216	wikigene:LOC100264216	EntrezGene:LOC100267720
wikigene:LOC100267720	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF7	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI0001BE4E58	ArrayExpress:VIT_04s0044g00410	EnsemblPlantsGene:VIT_04s0044g00410	EnsemblPlants:VIT_04s0044g00410.t01	InterPro:WAT1-related	RefSeq:XP_002271595
RefSeq:XP_002271595.2	SEG:seg	:	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7U439]

Coordinates

chr4:+:21152724..21154968

Molecular Weight (calculated)

42239.2 Da

IEP (calculated)

9.363

GRAVY (calculated)

0.684

Length

392 amino acids

Sequence
(BLAST)

001: MATGKLRNLL EGLKPAMTMV IVQIIFGGLN IMYKLARNDG MSMKILVAYR NIFATAIMVP LALIFEGKSR PKLTWMIFLQ GSLCGLFGGS LGQNLYAESL
101: SLTSATFVAA MTNLVPAMTF VMAVFLRMER LAIGTIAGKA KLMGTIMSLG GAMILTFYKG VEIKLWSTNI NLLHHGAAAL QESSPNQVLG SLLAVASCVC
201: IAVWLIVQTK MSMVYPSYSG TALMCVCASI QSVVYAMCTE RDWSAWKLGW DIRLLTVVYS GVLASGLMVT LMTWVSRMRG PLFVSSFFPL MLVTVAILGS
301: LLLHEQLHIG SIIAAVLIIV GLYIVLWGKG KEMKQTAQIH AAQSFSEQDL RHIVIENSSN SECKPEASGI IGPIEPADLG SGVPSAAAVV NK

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.