Factsheet for VIT_04s0044g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

plastid 2
golgi 3
plasma membrane 3
extracellular 3
endoplasmic reticulum 2
vacuole 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	95.42	40.58
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	40.46	33.33
VIT_04s0044g00480.t01	Wine grape	mitochondrion	65.65	33.2
VIT_04s0044g00410.t01	Wine grape	plasma membrane	95.42	31.89
VIT_04s0044g00360.t01	Wine grape	plasma membrane	76.34	31.25
VIT_11s0052g00570.t01	Wine grape	extracellular	19.08	31.25
VIT_04s0044g00390.t01	Wine grape	plasma membrane	95.42	29.21
VIT_04s0044g00420.t01	Wine grape	plastid	75.57	25.45
VIT_04s0044g00460.t01	Wine grape	plasma membrane	56.49	23.27
VIT_04s0044g00380.t01	Wine grape	plasma membrane	76.34	22.83
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	40.46	14.4
VIT_01s0010g03480.t01	Wine grape	plasma membrane	37.4	13.54
VIT_01s0010g03450.t01	Wine grape	plasma membrane	35.88	12.98

Protein Annotations

MapMan:24.2.1.5	ProteinID:CBI37621	ProteinID:CBI37621.3	UniProt:D7U445	InterPro:EamA_dom	EMBL:FN596506
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF7	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE4EB3	ArrayExpress:VIT_04s0044g00350
EnsemblPlantsGene:VIT_04s0044g00350	EnsemblPlants:VIT_04s0044g00350.t01	InterPro:WAT1-related	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7U445]

Coordinates

chr4:+:21075094..21076024

Molecular Weight (calculated)

14627.6 Da

IEP (calculated)

8.832

GRAVY (calculated)

1.008

Length

131 amino acids

Sequence
(BLAST)

001: MVLQHYKIWL IVQTKMSMVY PSYSGTALMC VCASIQSVVY AMCTERDWSA WKLGWDIRLL TVVYSGVLAS GLMVTLMTWV SRMRGPLFVS SFFPLMLATV
101: AILGSHLLHE QLHIGSIIAA VLIIVGLYIV L

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.