Factsheet for VIT_11s0052g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, plasma membrane, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	31.25	19.08
GSMUA_Achr5P04850_001	Banana	plasma membrane	53.75	17.27
VIT_04s0044g00480.t01	Wine grape	mitochondrion	33.75	10.42
VIT_04s0044g00360.t01	Wine grape	plasma membrane	33.75	8.44
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	31.25	8.12
VIT_01s0010g03450.t01	Wine grape	plasma membrane	35.0	7.73
VIT_01s0010g03480.t01	Wine grape	plasma membrane	35.0	7.73
VIT_04s0044g00410.t01	Wine grape	plasma membrane	35.0	7.14
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	32.5	7.07
VIT_04s0044g00420.t01	Wine grape	plastid	33.75	6.94
VIT_04s0044g00390.t01	Wine grape	plasma membrane	35.0	6.54
VIT_04s0044g00380.t01	Wine grape	plasma membrane	33.75	6.16
VIT_04s0044g00460.t01	Wine grape	plasma membrane	21.25	5.35
HORVU4Hr1G034530.1	Barley	golgi, plasma membrane	0.0	0.0
CDY00079	Canola	extracellular	0.0	0.0
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	0.0	0.0
CDY01937	Canola	extracellular, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EntrezGene:100852617	wikigene:100852617	MapMan:24.2.1.5	ProteinID:CBI17866	ProteinID:CBI17866.3	UniProt:D7SQD5
EMBL:FN594964	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100852617	wikigene:LOC100852617
PANTHER:PTHR31218	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE17C6	ArrayExpress:VIT_11s0052g00570	EnsemblPlantsGene:VIT_11s0052g00570
EnsemblPlants:VIT_11s0052g00570.t01	InterPro:WAT1-related	RefSeq:XP_003633216	RefSeq:XP_003633216.1	:	:

Description

No Description!

Coordinates

chr11:-:18007508..18008272

Molecular Weight (calculated)

8524.6 Da

IEP (calculated)

5.609

GRAVY (calculated)

0.839

Length

80 amino acids

Sequence
(BLAST)

1: MTWSIGIKGP VFSASFNPLL VLFSFLLNTF VLGSSAHLGS IVGAVLVIVG LYLLLWAKAN DVEKKDMDVG DSTCSPLIQP

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.