Factsheet for GSMUA_Achr5P04850_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00570.t01	Wine grape	extracellular	17.27	53.75
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	16.47	23.03
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	16.06	22.47
GSMUA_Achr7P04640_001	Banana	extracellular, golgi, vacuole	26.1	20.06
GSMUA_Achr5P01060_001	Banana	golgi, plasma membrane, vacuole	27.31	18.89
GSMUA_Achr1P06340_001	Banana	extracellular, golgi	25.7	18.13
GSMUA_AchrUn_...	Banana	plasma membrane	26.91	17.87
GSMUA_Achr9P16660_001	Banana	golgi, plasma membrane, vacuole	26.51	17.55
HORVU4Hr1G034530.1	Barley	golgi, plasma membrane	11.65	15.93
GSMUA_Achr6P13070_001	Banana	plasma membrane	24.1	15.42
GSMUA_Achr7P17540_001	Banana	plasma membrane	25.7	11.21
CDY00079	Canola	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr5P04850_001	EnsemblPlants:GSMUA_Achr5T04850_001	EnsemblPlantsGene:GSMUA_Achr5G04850_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481
TMHMM:TMhelix	UniParc:UPI000295157F	UniProt:M0SVR4	MapMan:24.2.1.5	:	:

Description

Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G04850_001]

Coordinates

chr5:-:3558522..3560528

Molecular Weight (calculated)

26519.8 Da

IEP (calculated)

8.215

GRAVY (calculated)

0.732

Length

249 amino acids

Sequence
(BLAST)

001: MFTTSLRYVT ATFQSVAMNT IPVAVFVLAA ATGRERFRFC SLGGQWKLWG TLASATGATI VVLLSGRDSA GLTAGDGGRL VGIVMVGVAV LAEATANLLV
101: ERVALQYHAD LKLSAMITVF GTLQVAVVAG TMERDLSAWR IKWSGSLELL AILYGGILVN GVSYFARNWC IHKKGPVFGS AFSPLLVVFS FLLQIILIGV
201: TEELASIVGS VLVILGLYLL LWAKAKDDMV EQSHPVQAST AEPLLPTES

Best Arabidopsis Sequence Match ( AT2G37460.1 )
(BLAST)

001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV

Arabidopsis Description

WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.