Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01937 | Canola | extracellular, plasma membrane, vacuole | 51.19 | 34.4 |
| CDY45904 | Canola | plasma membrane | 85.71 | 19.83 |
| CDY66443 | Canola | plasma membrane | 85.71 | 19.83 |
| CDY35779 | Canola | plasma membrane | 84.52 | 19.56 |
| CDY69734 | Canola | plasma membrane | 46.43 | 13.0 |
| CDX97244 | Canola | endoplasmic reticulum, plasma membrane | 41.67 | 12.77 |
| CDY70635 | Canola | plasma membrane | 38.1 | 12.7 |
| CDY51711 | Canola | plasma membrane | 54.76 | 12.67 |
| CDY07144 | Canola | plasma membrane | 54.76 | 12.64 |
| CDX83041 | Canola | plasma membrane | 46.43 | 12.11 |
| CDX97247 | Canola | plasma membrane | 51.19 | 11.91 |
| CDX86350 | Canola | plasma membrane | 85.71 | 11.86 |
| CDX68485 | Canola | plasma membrane | 45.24 | 11.84 |
| CDX97249 | Canola | plasma membrane | 50.0 | 11.6 |
| CDY01936 | Canola | plasma membrane | 50.0 | 11.6 |
| CDX91849 | Canola | plasma membrane | 47.62 | 11.05 |
| CDX74381 | Canola | plasma membrane | 47.62 | 10.99 |
| CDY70787 | Canola | golgi, plasma membrane | 33.33 | 10.98 |
| CDX74385 | Canola | plasma membrane | 46.43 | 10.77 |
| CDY15204 | Canola | plasma membrane | 46.43 | 10.74 |
| CDX90005 | Canola | plasma membrane | 46.43 | 10.74 |
| CDY55329 | Canola | plasma membrane | 44.05 | 10.25 |
| CDX91847 | Canola | plasma membrane | 41.67 | 9.8 |
| HORVU4Hr1G034530.1 | Barley | golgi, plasma membrane | 20.24 | 9.34 |
| CDY37472 | Canola | cytosol, golgi, plasma membrane | 40.48 | 9.24 |
| CDY32446 | Canola | plasma membrane | 40.48 | 9.24 |
| CDY24356 | Canola | plasma membrane | 36.9 | 8.54 |
| CDY64689 | Canola | plasma membrane | 33.33 | 8.09 |
| CDY62464 | Canola | plasma membrane | 34.52 | 7.86 |
| CDY12698 | Canola | plasma membrane | 34.52 | 7.63 |
| CDX81497 | Canola | plasma membrane | 34.52 | 7.61 |
| CDX91850 | Canola | plasma membrane | 26.19 | 7.41 |
| CDY59354 | Canola | plasma membrane | 32.14 | 7.07 |
| CDY42121 | Canola | plasma membrane | 25.0 | 6.1 |
| CDX94976 | Canola | plasma membrane | 27.38 | 5.97 |
| CDY69907 | Canola | plasma membrane | 27.38 | 5.97 |
| CDX94974 | Canola | plasma membrane | 27.38 | 5.97 |
| CDY32447 | Canola | plasma membrane | 11.9 | 3.33 |
| CDY64772 | Canola | plasma membrane | 7.14 | 1.98 |
| CDX97245 | Canola | plastid | 2.38 | 1.79 |
| CDY06357 | Canola | plasma membrane | 3.57 | 1.01 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 1.19 | 0.41 |
| CDY64463 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY60103 | Canola | plasma membrane | 0.0 | 0.0 |
| GSMUA_Achr5P04850_001 | Banana | plasma membrane | 0.0 | 0.0 |
| VIT_11s0052g00570.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY00079 | EnsemblPlantsGene:GSBRNA2T00109573001 | GO:A0A078EH38 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF10 | ProteinID:CDY00079 | ProteinID:CDY00079.1 | TMHMM:TMhelix | UniParc:UPI0004EEBEE5 |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
BnaC09g02220D
Coordinates
chrLK031916:-:667104..667746
Molecular Weight (calculated)
9237.0 Da
IEP (calculated)
11.387
GRAVY (calculated)
0.732
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKLDGKLWK AVIMMSIINI ALSGVNVMFK KMLNQGVNRM VAATYRLAAG TLFLTPLAIF LERHNRPKLT GSILCSLFLS ALLG
001: MVKFDTKLWK AVLMMSMINI GLSVVNVMFK KMIDEGLNRM VATTYRLAVG TLFLIPFAIF LERHNRPKLT GRILCSLFFS ALLGTSLVQY FFLIGLEYTS
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSVSN PIYYLINLQD LYVNIYKILF
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSVSN PIYYLINLQD LYVNIYKILF
Arabidopsis Description
WAT1-related protein At3g30340 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI65]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.