Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002077.1-P | Field mustard | plasma membrane | 100.0 | 34.99 |
| CDY24356 | Canola | plasma membrane | 100.0 | 34.99 |
| CDX97245 | Canola | plastid | 26.77 | 30.36 |
| CDY60103 | Canola | plasma membrane | 23.62 | 27.78 |
| CDX81497 | Canola | plasma membrane | 56.69 | 18.9 |
| CDY12698 | Canola | plasma membrane | 55.91 | 18.68 |
| CDY42121 | Canola | plasma membrane | 48.82 | 18.02 |
| CDY64689 | Canola | plasma membrane | 46.46 | 17.05 |
| CDY59354 | Canola | plasma membrane | 48.82 | 16.23 |
| CDY62464 | Canola | plasma membrane | 45.67 | 15.72 |
| CDX91850 | Canola | plasma membrane | 35.43 | 15.15 |
| CDX83041 | Canola | plasma membrane | 33.86 | 13.35 |
| CDY06357 | Canola | plasma membrane | 30.71 | 13.18 |
| CDX68485 | Canola | plasma membrane | 33.07 | 13.08 |
| CDY64772 | Canola | plasma membrane | 30.71 | 12.87 |
| PGSC0003DMT400077027 | Potato | plasma membrane | 29.13 | 12.67 |
| Solyc07g015910.2.1 | Tomato | plasma membrane | 38.58 | 12.47 |
| CDX91849 | Canola | plasma membrane | 34.65 | 12.15 |
| CDX74381 | Canola | plasma membrane | 34.65 | 12.09 |
| CDX74385 | Canola | plasma membrane | 33.86 | 11.88 |
| CDX97249 | Canola | plasma membrane | 33.86 | 11.88 |
| CDX91847 | Canola | plasma membrane | 33.07 | 11.76 |
| CDY32447 | Canola | plasma membrane | 26.77 | 11.33 |
| CDY01936 | Canola | plasma membrane | 32.28 | 11.33 |
| CDY66443 | Canola | plasma membrane | 32.28 | 11.29 |
| CDY32446 | Canola | plasma membrane | 31.5 | 10.87 |
| CDY37472 | Canola | cytosol, golgi, plasma membrane | 31.5 | 10.87 |
| CDY35779 | Canola | plasma membrane | 29.92 | 10.47 |
| CDY45904 | Canola | plasma membrane | 29.13 | 10.19 |
| CDY07144 | Canola | plasma membrane | 29.13 | 10.16 |
| CDX94976 | Canola | plasma membrane | 30.71 | 10.13 |
| CDY69907 | Canola | plasma membrane | 30.71 | 10.13 |
| CDX94974 | Canola | plasma membrane | 29.92 | 9.87 |
| CDY69734 | Canola | plasma membrane | 22.83 | 9.67 |
| CDX90005 | Canola | plasma membrane | 27.56 | 9.64 |
| CDY15204 | Canola | plasma membrane | 27.56 | 9.64 |
| CDY55329 | Canola | plasma membrane | 25.98 | 9.14 |
| CDY51711 | Canola | plasma membrane | 25.98 | 9.09 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 14.96 | 7.79 |
| CDX97247 | Canola | plasma membrane | 20.47 | 7.2 |
| CDX86350 | Canola | plasma membrane | 32.28 | 6.75 |
| CDY70635 | Canola | plasma membrane | 5.51 | 2.78 |
| CDY70787 | Canola | golgi, plasma membrane | 4.72 | 2.35 |
| CDX97244 | Canola | endoplasmic reticulum, plasma membrane | 4.72 | 2.19 |
| CDY01937 | Canola | extracellular, plasma membrane, vacuole | 0.0 | 0.0 |
| CDY00079 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078JGF1 | UniProt:A0A078JGF1 | EnsemblPlants:CDY64463 | ProteinID:CDY64463 | ProteinID:CDY64463.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00041249001 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EB4FC5 | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng43950DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGF1]
Coordinates
chrLK034469:-:26951..27508
Molecular Weight (calculated)
14190.0 Da
IEP (calculated)
9.750
GRAVY (calculated)
0.797
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMMGSLVAL LVALIWKPDF EEWRLGWDIK LFARIFSGIM ISGMAFAVIV WCVDANGPVF VSMFRPVRLV VVVIVASLIL QEPIYSGSII GTVILVGGLY
101: LVLWAKKKEM KSMSNPVETN RTDRNVV
101: LVLWAKKKEM KSMSNPVETN RTDRNVV
001: MKDITAMVVV QIATAGLNIF FKLAMEDGMN PSVLVAYRLL FATLFMIPIC FIFQRKKRPE FTCRLMLLAL LSGLLGVVIP SILTITGLAL TSATFTSAAG
101: VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS ISLWFLLQVK
201: ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG SFLLDETLHL
301: GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP
101: VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS ISLWFLLQVK
201: ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG SFLLDETLHL
301: GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP
Arabidopsis Description
nodulin MtN21 /EamA-like transporter family protein [Source:TAIR;Acc:AT1G68170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.