Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024767.1-P | Field mustard | plasma membrane | 93.72 | 98.35 |
| CDY42121 | Canola | plasma membrane | 87.96 | 97.67 |
| AT1G25270.1 | Thale cress | plasma membrane | 73.3 | 78.87 |
| CDY64689 | Canola | plasma membrane | 69.9 | 77.17 |
| CDY62464 | Canola | plasma membrane | 69.9 | 72.36 |
| CDY12698 | Canola | plasma membrane | 53.66 | 53.95 |
| CDX81497 | Canola | plasma membrane | 53.14 | 53.28 |
| CDY64463 | Canola | plasma membrane | 16.23 | 48.82 |
| CDY24356 | Canola | plasma membrane | 45.55 | 47.93 |
| PGSC0003DMT400077027 | Potato | plasma membrane | 30.63 | 40.07 |
| Solyc07g015910.2.1 | Tomato | plasma membrane | 38.22 | 37.15 |
| CDY00079 | Canola | extracellular | 7.07 | 32.14 |
| CDY70635 | Canola | plasma membrane | 19.63 | 29.76 |
| CDY06357 | Canola | plasma membrane | 22.77 | 29.39 |
| CDY64772 | Canola | plasma membrane | 23.3 | 29.37 |
| CDY69734 | Canola | plasma membrane | 23.04 | 29.33 |
| CDY69907 | Canola | plasma membrane | 29.32 | 29.09 |
| CDX94976 | Canola | plasma membrane | 29.32 | 29.09 |
| CDY66443 | Canola | plasma membrane | 27.49 | 28.93 |
| CDX94974 | Canola | plasma membrane | 29.06 | 28.83 |
| CDY32446 | Canola | plasma membrane | 27.75 | 28.8 |
| CDY37472 | Canola | cytosol, golgi, plasma membrane | 27.75 | 28.8 |
| CDY32447 | Canola | plasma membrane | 22.51 | 28.67 |
| CDY15204 | Canola | plasma membrane | 27.23 | 28.65 |
| CDX90005 | Canola | plasma membrane | 27.23 | 28.65 |
| CDY70787 | Canola | golgi, plasma membrane | 19.11 | 28.63 |
| CDX83041 | Canola | plasma membrane | 24.08 | 28.57 |
| CDY55329 | Canola | plasma membrane | 26.7 | 28.25 |
| CDY45904 | Canola | plasma membrane | 26.7 | 28.1 |
| CDX68485 | Canola | plasma membrane | 23.56 | 28.04 |
| CDY01937 | Canola | extracellular, plasma membrane, vacuole | 9.16 | 28.0 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 17.8 | 27.87 |
| CDY35779 | Canola | plasma membrane | 26.18 | 27.55 |
| CDX74381 | Canola | plasma membrane | 25.92 | 27.2 |
| CDX91849 | Canola | plasma membrane | 25.65 | 27.07 |
| CDX97244 | Canola | endoplasmic reticulum, plasma membrane | 19.37 | 27.01 |
| CDX91850 | Canola | plasma membrane | 20.94 | 26.94 |
| CDY60103 | Canola | plasma membrane | 7.59 | 26.85 |
| CDX74385 | Canola | plasma membrane | 25.13 | 26.52 |
| CDX97249 | Canola | plasma membrane | 24.87 | 26.24 |
| CDY01936 | Canola | plasma membrane | 24.87 | 26.24 |
| CDY51711 | Canola | plasma membrane | 24.61 | 25.9 |
| CDY07144 | Canola | plasma membrane | 24.61 | 25.82 |
| CDX91847 | Canola | plasma membrane | 22.77 | 24.37 |
| CDX97245 | Canola | plastid | 7.07 | 24.11 |
| CDX97247 | Canola | plasma membrane | 22.51 | 23.82 |
| CDX86350 | Canola | plasma membrane | 27.49 | 17.3 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078J579 | UniProt:A0A078J579 | EnsemblPlants:CDY59354 | ProteinID:CDY59354 | ProteinID:CDY59354.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00025915001 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE49AD | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng34800DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078J579]
Coordinates
chrLK033754:-:1861..4551
Molecular Weight (calculated)
41740.3 Da
IEP (calculated)
9.773
GRAVY (calculated)
0.643
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRLGIKVQY RSCGRIEDML KEVKAISIML VVQFIFAGMY ILFKLTVDDG TNLRILVAYR LSFATISMLP LALIIQRDKR PEFTWRLLFL AFLSGMLGAA
101: IPNFLYLPGL ALTSATFSTA ASILGPLITL VLSVAFRIET LRLGTNEGRA KLVGTLLGAG GALVFVFYKG VEIHIWSTHV DLLKNSNTGQ SSGQATENHH
201: ISIPGVLMVF GCNVSFSLWL ILQAKIGDQL GGSYWNVSLM NAMGSLVCMI VALCSERNWK QWRLGWNISL LATVYSGVVV SGMVIPLIAW CIKTKGPLYV
301: TMFSPIRLVI VALAGSFALE ETLHLGSIIG AMIMVGGVYL VIWCKMKEAK SASTALDLIE TNKNIKEVNL GNLSAVNNRD VP
101: IPNFLYLPGL ALTSATFSTA ASILGPLITL VLSVAFRIET LRLGTNEGRA KLVGTLLGAG GALVFVFYKG VEIHIWSTHV DLLKNSNTGQ SSGQATENHH
201: ISIPGVLMVF GCNVSFSLWL ILQAKIGDQL GGSYWNVSLM NAMGSLVCMI VALCSERNWK QWRLGWNISL LATVYSGVVV SGMVIPLIAW CIKTKGPLYV
301: TMFSPIRLVI VALAGSFALE ETLHLGSIIG AMIMVGGVYL VIWCKMKEAK SASTALDLIE TNKNIKEVNL GNLSAVNNRD VP
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.