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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033290.1-P Field mustard plasma membrane 97.52 99.72
CDY15204 Canola plasma membrane 98.07 98.07
CDY32447 Canola plasma membrane 69.97 84.67
CDY55329 Canola plasma membrane 84.02 84.49
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 82.64 82.19
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 73.28 75.57
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 69.7 75.07
CDY70787 Canola golgi, plasma membrane 49.86 70.98
CDX97244 Canola endoplasmic reticulum, plasma membrane 52.62 69.71
CDY70635 Canola plasma membrane 48.21 69.44
CDY32446 Canola plasma membrane 67.77 66.85
CDY37472 Canola cytosol, golgi, plasma membrane 67.77 66.85
CDY01937 Canola extracellular, plasma membrane, vacuole 19.56 56.8
CDX97245 Canola plastid 16.53 53.57
CDY60103 Canola plasma membrane 15.43 51.85
CDY69734 Canola plasma membrane 41.6 50.33
CDX83041 Canola plasma membrane 43.8 49.38
CDY51711 Canola plasma membrane 49.04 49.04
CDY07144 Canola plasma membrane 48.21 48.08
CDX74385 Canola plasma membrane 47.93 48.07
CDX97249 Canola plasma membrane 47.66 47.79
CDX68485 Canola plasma membrane 42.15 47.66
CDX91850 Canola plasma membrane 38.57 47.14
CDX74381 Canola plasma membrane 47.11 46.98
CDX91849 Canola plasma membrane 46.83 46.96
CDY01936 Canola plasma membrane 46.83 46.96
CDY00079 Canola extracellular 10.74 46.43
CDX91847 Canola plasma membrane 44.08 44.82
VIT_01s0010g03450.t01 Wine grape plasma membrane 41.32 41.44
CDX97247 Canola plasma membrane 41.05 41.27
VIT_01s0010g03480.t01 Wine grape plasma membrane 40.77 40.88
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.02 39.77
CDY45904 Canola plasma membrane 39.67 39.67
KRG90631 Soybean plasma membrane 37.74 39.6
Solyc04g007590.1.1 Tomato nucleus 37.74 39.48
CDY35779 Canola plasma membrane 39.39 39.39
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 34.99 39.2
CDY66443 Canola plasma membrane 38.84 38.84
KRH04198 Soybean extracellular, plasma membrane, vacuole 26.72 38.65
KRH40897 Soybean plasma membrane 39.12 37.08
TraesCS6A01G008700.1 Wheat plasma membrane 35.26 36.57
TraesCS6D01G009900.2 Wheat plasma membrane 35.26 36.57
Zm00001d054085_P001 Maize plasma membrane 34.71 36.42
KRG89109 Soybean plasma membrane 38.29 36.29
GSMUA_Achr1P06340_001 Banana extracellular, golgi 34.71 35.69
HORVU6Hr1G000500.17 Barley plasma membrane 35.26 35.56
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 34.16 35.43
EER87705 Sorghum plasma membrane 35.81 35.42
PGSC0003DMT400015286 Potato plasma membrane 35.81 35.33
OQU75691 Sorghum plasma membrane 34.44 35.31
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 33.88 35.14
Os06t0107600-01 Rice plasma membrane 34.99 34.99
Os04t0422300-01 Rice plasma membrane 35.81 34.76
Os06t0109300-01 Rice golgi, plasma membrane 34.44 34.72
OQU84142 Sorghum plasma membrane 35.54 34.4
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 33.33 34.38
TraesCS6B01G015400.1 Wheat plasma membrane 32.78 34.29
TraesCS1B01G041700.1 Wheat plasma membrane 30.03 34.17
TraesCS5D01G021800.1 Wheat plasma membrane 31.13 34.04
HORVU7Hr1G002200.2 Barley plasma membrane 34.44 33.97
TraesCS6D01G044200.1 Wheat plasma membrane 30.85 33.94
TraesCS6A01G008800.2 Wheat plasma membrane 32.78 33.9
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 33.33 33.89
TraesCS5A01G015800.1 Wheat plasma membrane 30.58 33.64
HORVU7Hr1G019700.4 Barley plasma membrane 33.06 33.61
TraesCS6D01G009800.1 Wheat plasma membrane 32.51 33.52
TraesCS4B01G086600.1 Wheat plasma membrane 32.78 33.52
Zm00001d054081_P001 Maize plasma membrane 32.23 33.43
TraesCS7A01G020400.1 Wheat plasma membrane 34.16 33.42
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 33.33 33.33
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 33.88 33.15
TraesCS7D01G022800.1 Wheat plasma membrane 33.33 33.06
EES04319 Sorghum extracellular, golgi, plasma membrane 33.06 33.06
TraesCS7A01G024900.1 Wheat plasma membrane 33.06 32.7
TraesCS4A01G472400.1 Wheat plasma membrane 33.88 32.63
TraesCS7D01G082900.1 Wheat plasma membrane 31.96 32.49
TraesCS4A01G464100.1 Wheat plasma membrane 33.06 32.34
HORVU6Hr1G000600.1 Barley plasma membrane 31.68 32.3
Zm00001d045576_P001 Maize plasma membrane 35.26 32.24
TraesCS6B01G014700.1 Wheat plasma membrane 31.41 32.2
TraesCS6D01G012400.1 Wheat plasma membrane 31.41 32.2
TraesCS5B01G014100.1 Wheat plasma membrane 30.85 32.18
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 33.33 32.1
TraesCS6A01G009400.1 Wheat plasma membrane 31.13 31.92
TraesCS6B01G015700.1 Wheat plasma membrane 31.13 31.83
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 15.43 31.46
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 15.43 31.46
CDY64772 Canola plasma membrane 25.62 30.69
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 22.86 30.51
TraesCS6A01G038300.1 Wheat plasma membrane 20.11 30.17
CDY06357 Canola plasma membrane 24.52 30.07
CDY64689 Canola plasma membrane 27.82 29.19
CDY42121 Canola plasma membrane 27.55 29.07
TraesCS7A01G087800.1 Wheat plasma membrane 32.23 29.03
TraesCS4A01G386700.1 Wheat plasma membrane 31.96 28.71
CDY24356 Canola plasma membrane 28.65 28.65
CDY12698 Canola plasma membrane 29.48 28.16
TraesCS4D01G164600.1 Wheat plasma membrane 21.21 28.1
CDX81497 Canola plasma membrane 29.48 28.08
CDX94976 Canola plasma membrane 29.75 28.05
CDY62464 Canola plasma membrane 28.37 27.91
CDX94974 Canola plasma membrane 29.48 27.79
CDY69907 Canola plasma membrane 29.48 27.79
CDY64463 Canola plasma membrane 9.64 27.56
CDY59354 Canola plasma membrane 28.65 27.23
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 19.56 27.2
HORVU5Hr1G067230.40 Barley mitochondrion 32.78 23.56
CDX86350 Canola plasma membrane 38.57 23.06
CDY62465 Canola extracellular, plasma membrane, vacuole 15.15 22.54
HORVU5Hr1G002470.1 Barley golgi 15.43 22.49
GSMUA_Achr7P17540_001 Banana plasma membrane 35.26 22.42
Os06t0109200-01 Rice plasma membrane 19.01 19.27
Zm00001d045567_P001 Maize plasma membrane 34.16 16.15
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5GO:A0A078DLC3EnsemblPlants:CDX90005ProteinID:CDX90005ProteinID:CDX90005.1InterPro:EamA_dom
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00150504001PFAM:PF00892PANTHER:PTHR31218
PANTHER:PTHR31218:SF10SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EDFB83InterPro:WAT1-relatedSEG:seg
Description
BnaA10g00770D
Coordinates
chrLK031861:-:1223780..1226132
Molecular Weight (calculated)
39768.1 Da
IEP (calculated)
8.932
GRAVY (calculated)
0.475
Length
363 amino acids
Sequence
(BLAST)
001: MGEEMKGVRV IEEWSPVIVM VISNVAMGSV NALVKKALDV GVNHMVVGAY RMAISALILA PFAYILERKT RPELTFRLLV DHFISGLLGA SLMQFFFLLG
101: LSYTSATVSC ALVSMLPAIT FTLALIFRTE NVKNLKTKAG ILKILGTLIC ISGALFLTFY KGPQISNPHS HKEAVHNHSD NDQDKTKNWL LGCLYLTIGT
201: TLLSLWMLFQ GNLSIKYPCK YSSTCLMSVF AAFQCALLSL YKGRDAHDWV IGDKFVLIVI LYAGVVGQAM STVATTWGIK KLGAVFASTF TPITLISATL
301: FDFLILHTPL YLGSVIGSAV AVMGLYVFLW GKNNETEAST TLPPRMDNQD QNVNNNNDSK SPV
Best Arabidopsis Sequence Match ( AT1G01070.1 )
(BLAST)
001: MAGDMQGVRV VEKYSPVIVM VMSNVAMGSV NALVKKALDV GVNHMVIGAY RMAISALILV PFAYVLERKT RPQITFRLMV DHFVSGLLGA SLMQFFFLLG
101: LSYTSATVSC ALVSMLPAIT FALALIFRTE NVKILKTKAG MLKVIGTLIC ISGALFLTFY KGPQISNSHS HSHGGASHNN NDQDKANNWL LGCLYLTIGT
201: VLLSLWMLFQ GTLSIKYPCK YSSTCLMSIF AAFQCALLSL YKSRDVNDWI IDDRFVITVI IYAGVVGQAM TTVATTWGIK KLGAVFASAF FPLTLISATL
301: FDFLILHTPL YLGSVIGSLV TITGLYMFLW GKNKETESST ALSSGMDNEA QYTTPNKDND SKSPV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WFU3]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.