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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 4
  • golgi 4
  • plasma membrane 5
  • endoplasmic reticulum 3
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane, plastid
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d054081_P001 Maize plasma membrane 88.98 92.29
Os04t0422300-01 Rice plasma membrane 69.42 67.38
TraesCS6B01G014700.1 Wheat plasma membrane 65.29 66.95
TraesCS6D01G012400.1 Wheat plasma membrane 65.29 66.95
TraesCS6B01G015700.1 Wheat plasma membrane 64.74 66.2
TraesCS6A01G009400.1 Wheat plasma membrane 63.36 64.97
HORVU6Hr1G000600.1 Barley plasma membrane 62.81 64.04
TraesCS5A01G015800.1 Wheat plasma membrane 56.75 62.42
TraesCS1B01G041700.1 Wheat plasma membrane 54.82 62.38
TraesCS5D01G021800.1 Wheat plasma membrane 56.75 62.05
TraesCS5B01G014100.1 Wheat plasma membrane 58.95 61.49
TraesCS6D01G044200.1 Wheat plasma membrane 52.89 58.18
GSMUA_Achr1P06340_001 Banana extracellular, golgi 55.1 56.66
TraesCS6A01G038300.1 Wheat plasma membrane 37.74 56.61
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 49.86 55.86
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 26.72 54.49
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 26.72 54.49
OQU75691 Sorghum plasma membrane 48.48 49.72
EER87705 Sorghum plasma membrane 47.11 46.59
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 33.06 45.98
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 44.08 44.82
OQU84142 Sorghum plasma membrane 46.01 44.53
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 44.9 44.29
KRH58997 Soybean plasma membrane 43.25 43.98
HORVU5Hr1G002470.1 Barley golgi 29.48 42.97
Solyc12g099580.1.1 Tomato plasma membrane 42.42 42.78
VIT_01s0010g03480.t01 Wine grape plasma membrane 42.15 42.27
PGSC0003DMT400011804 Potato plasma membrane 41.6 41.94
KRG90631 Soybean plasma membrane 39.94 41.91
VIT_01s0010g03450.t01 Wine grape plasma membrane 41.6 41.71
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 39.67 41.5
PGSC0003DMT400029440 Potato plasma membrane 26.72 40.76
KRH11051 Soybean plasma membrane 41.6 40.37
Solyc04g007590.1.1 Tomato nucleus 38.57 40.35
KRH42891 Soybean plasma membrane 42.7 39.34
CDY60103 Canola plasma membrane 11.29 37.96
Solyc01g066850.2.1 Tomato plasma membrane 40.77 37.56
KRG89109 Soybean plasma membrane 39.39 37.34
CDY69734 Canola plasma membrane 30.58 37.0
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 21.21 36.84
KRH40897 Soybean plasma membrane 38.84 36.81
KRH04198 Soybean extracellular, plasma membrane, vacuole 25.34 36.65
Bra037413.1-P Field mustard plasma membrane 36.36 36.36
CDY51711 Canola plasma membrane 36.36 36.36
CDY07144 Canola plasma membrane 36.09 35.99
AT4G01440.1 Thale cress plasma membrane 36.09 35.89
CDY35779 Canola plasma membrane 35.81 35.81
PGSC0003DMT400015286 Potato plasma membrane 36.09 35.6
CDY45904 Canola plasma membrane 35.54 35.54
CDY66443 Canola plasma membrane 35.54 35.54
Bra029909.1-P Field mustard plasma membrane 24.52 35.18
CDX83041 Canola plasma membrane 30.85 34.78
AT4G01450.2 Thale cress plasma membrane 34.44 34.63
CDX68485 Canola plasma membrane 30.58 34.58
AT3G30340.1 Thale cress plasma membrane 34.44 34.34
CDX97249 Canola plasma membrane 34.16 34.25
Bra000926.1-P Field mustard plasma membrane 30.85 34.25
CDY32447 Canola plasma membrane 28.1 34.0
Bra000923.1-P Field mustard plasma membrane 33.61 33.98
Bra033290.1-P Field mustard plasma membrane 33.06 33.8
CDX91849 Canola plasma membrane 33.61 33.7
CDY01936 Canola plasma membrane 33.61 33.7
GSMUA_Achr7P17540_001 Banana plasma membrane 52.89 33.63
Bra008548.1-P Field mustard extracellular, plasma membrane 32.23 33.52
CDX74385 Canola plasma membrane 33.33 33.43
CDX74381 Canola plasma membrane 33.33 33.24
CDX90005 Canola plasma membrane 33.06 33.06
CDY15204 Canola plasma membrane 32.78 32.78
KXG27497 Sorghum plasma membrane 35.54 32.74
Bra032617.1-P Field mustard plasma membrane 32.51 32.69
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 32.78 32.6
CDY70635 Canola plasma membrane 22.59 32.54
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 31.41 32.39
AT4G01430.1 Thale cress plasma membrane 32.51 32.33
CDY70787 Canola golgi, plasma membrane 22.59 32.16
CDX97247 Canola plasma membrane 31.96 32.13
CDY55329 Canola plasma membrane 31.96 32.13
EES11693 Sorghum endoplasmic reticulum, plasma membrane, vacuole 33.06 32.09
Bra000925.1-P Field mustard plasma membrane 30.3 32.07
CDX91847 Canola plasma membrane 31.41 31.93
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 23.97 31.75
CDX97244 Canola endoplasmic reticulum, plasma membrane 23.97 31.75
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 29.48 31.75
CDX91850 Canola plasma membrane 25.9 31.65
EES00623 Sorghum plasma membrane 34.71 31.5
Bra036199.1-P Field mustard plasma membrane 34.71 31.42
Bra032618.1-P Field mustard plasma membrane 30.85 30.43
CDY32446 Canola plasma membrane 30.85 30.43
CDY37472 Canola cytosol, golgi, plasma membrane 30.58 30.16
KXG26293 Sorghum plasma membrane 30.3 28.8
Bra020740.1-P Field mustard extracellular 15.98 28.71
KXG38720 Sorghum plasma membrane 26.45 27.12
OQU84146 Sorghum golgi, mitochondrion, peroxisome, plasma membrane 29.75 26.93
Bra008546.1-P Field mustard cytosol, extracellular, plastid 16.8 26.29
OQU83175 Sorghum golgi, peroxisome, plasma membrane 25.9 26.18
EES15555 Sorghum plasma membrane 27.0 26.13
KXG19110 Sorghum plasma membrane 27.82 25.9
OQU91985 Sorghum extracellular, golgi 16.8 24.21
CDX97245 Canola plastid 6.89 22.32
CDX86350 Canola plasma membrane 35.54 21.25
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 41.87 20.62
Protein Annotations
MapMan:24.2.1.5EntrezGene:8066479UniProt:C5XRI5EnsemblPlants:EES04319ProteinID:EES04319ProteinID:EES04319.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF10EnsemblPlantsGene:SORBI_3004G003100SUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI0001A8589BInterPro:WAT1-relatedRefSeq:XP_002451343.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:251966..254420
Molecular Weight (calculated)
39140.4 Da
IEP (calculated)
10.107
GRAVY (calculated)
0.549
Length
363 amino acids
Sequence
(BLAST)
001: MGRYAWGDWK PTATMLSVVV VFAVLNTLTK MAFNQGMHTS VLITLRQLTA FLFLAPIAYY RERKTRPKMT LEIFVYLFFS AVLGASLTQW LFFVGLRYTT
101: ATFACAFINM TPMFTFLVAL PFGMEKLDLK TGAGIAKVIG TTVGFTGAIL LALYQGPSLT KPSPPPAAPG AAMAAAAGHG GGAHHQWAIG SVALLAGAAC
201: WSFWFILQSR LGKKYPALYS GNALMFLLSF LQMAAVGLAT ERDLSVWILR TKLQIITVLF VGVMGSGVGF LAMSWCIEQR GPVFTTAFTP LIQLIAGAIN
301: VVALHEQLHV GSALGSALVI AGLYFVLWAK TKEASDAPPP SSSNINALDQ EKPKQATQQR EDV
Best Arabidopsis Sequence Match ( AT4G01440.1 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.