CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plasma membrane

Predictor Summary:

plastid 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014933_P001	Maize	plasma membrane	74.31	82.09
TraesCS3A01G339800.1	Wheat	plasma membrane	57.36	60.37
TraesCS3B01G371400.1	Wheat	plasma membrane	57.36	60.37
TraesCS3D01G333300.1	Wheat	plasma membrane	57.36	60.37
HORVU3Hr1G080200.2	Barley	plasma membrane	56.61	54.31
Os12t0288000-02	Rice	golgi, plasma membrane	52.62	53.83
EES15555	Sorghum	plasma membrane	46.63	49.87
KXG19110	Sorghum	plasma membrane	48.38	49.74
KRH16968	Soybean	plasma membrane	34.41	42.59
KXG38720	Sorghum	plasma membrane	36.41	41.24
KRH72599	Soybean	plasma membrane	37.66	39.43
KRH53654	Soybean	plasma membrane	35.91	38.5
KRH72593	Soybean	cytosol, golgi, plasma membrane	37.66	38.42
OQU83175	Sorghum	golgi, peroxisome, plasma membrane	32.92	36.77
OQU91985	Sorghum	extracellular, golgi	21.95	34.92
PGSC0003DMT400001491	Potato	golgi, plasma membrane, plastid	25.94	34.21
Solyc03g080070.2.1	Tomato	plasma membrane	32.67	33.68
KRH38008	Soybean	plasma membrane	25.69	33.33
KXG27497	Sorghum	plasma membrane	31.17	31.73
EES00623	Sorghum	plasma membrane	31.42	31.5
OQU75691	Sorghum	plasma membrane	26.68	30.23
EES04319	Sorghum	extracellular, golgi, plasma membrane	26.93	29.75
EES11693	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	27.43	29.41
KXG26293	Sorghum	plasma membrane	27.93	29.32
OQU84142	Sorghum	plasma membrane	26.93	28.8
EER87714	Sorghum	endoplasmic reticulum, plasma membrane, plastid	24.19	27.17
EER87705	Sorghum	plasma membrane	24.44	26.7

Protein Annotations

MapMan:24.2.1.5	EntrezGene:8081336	UniProt:A0A1Z5RLB0	InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EnsemblPlants:OQU84146	ProteinID:OQU84146	ProteinID:OQU84146.1	PFAM:PF00892	PANTHER:PTHR31218
PANTHER:PTHR31218:SF26	EnsemblPlantsGene:SORBI_3004G003300	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000B8BAE74	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:257958..275381

Molecular Weight (calculated)

43446.2 Da

IEP (calculated)

10.569

GRAVY (calculated)

0.432

Length

401 amino acids

Sequence
(BLAST)

001: MCLRKCYSER RKIRSDRPAG GGGGVELVVG RRRSISSARR QDCGGGPGEK TTKMAWSSME AVVLPASMVL VQAFTMGALL LSKLALNVGM EPFVLLAYRN
101: LIGAIVVAPF ALYFDRSMVR KVTLKVMGWM SISALLSIVL AMGLHYYGLR ATTAAISVNF LNLIPVATFL MAVLLRVEKL AAGTWPGRAK MAGTAVCVGG
201: TMVASLYRGP LLHPWPTHLL RHRAATAPQH HRNMPLGTVY LCGSCLAYAL WFVVQTRVGR VFPCKYLSTM LACVCGTVQA LAIGAVISRG DPASTTWRLS
301: WDLRLVTVVY SGVFNTAATF CIISWAITRR GPIYPSMFNS LSLVATTVLD SLLLGTDVSV GSLLGDALII LGLYAFLWGK GREMKHLKQQ QEQQQLNGTG
401: P

Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)

001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP

Arabidopsis Description

WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.