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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 85.31 86.29
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 85.03 86.0
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 85.03 85.51
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 85.03 82.92
OQU84142 Sorghum plasma membrane 70.06 66.13
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 52.26 51.82
EER87705 Sorghum plasma membrane 50.56 48.77
EES04319 Sorghum extracellular, golgi, plasma membrane 49.72 48.48
KRH58997 Soybean plasma membrane 47.46 47.06
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 46.33 44.57
Solyc04g007590.1.1 Tomato nucleus 42.94 43.8
Solyc12g099580.1.1 Tomato plasma membrane 44.07 43.33
Zm00001d045567_P001 Maize plasma membrane 92.94 42.84
VIT_01s0010g03480.t01 Wine grape plasma membrane 43.79 42.82
PGSC0003DMT400011804 Potato plasma membrane 43.5 42.78
VIT_01s0010g03450.t01 Wine grape plasma membrane 43.22 42.27
KRH42891 Soybean plasma membrane 46.89 42.13
PGSC0003DMT400029440 Potato plasma membrane 28.25 42.02
KRH11051 Soybean plasma membrane 44.35 41.98
KRG90631 Soybean plasma membrane 40.11 41.04
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 39.55 40.35
KRG89109 Soybean plasma membrane 42.94 39.69
KRH40897 Soybean plasma membrane 42.94 39.69
CDY51711 Canola plasma membrane 40.68 39.67
Bra037413.1-P Field mustard plasma membrane 40.68 39.67
Os06t0109200-01 Rice plasma membrane 39.55 39.11
Solyc01g066850.2.1 Tomato plasma membrane 43.22 38.83
AT4G01440.1 Thale cress plasma membrane 39.83 38.63
PGSC0003DMT400015286 Potato plasma membrane 40.11 38.59
CDY07144 Canola plasma membrane 39.55 38.46
CDY69734 Canola plasma membrane 32.2 38.0
CDY60103 Canola plasma membrane 11.58 37.96
Bra000926.1-P Field mustard plasma membrane 34.75 37.61
CDX83041 Canola plasma membrane 34.18 37.58
CDY35779 Canola plasma membrane 38.42 37.47
AT3G30340.1 Thale cress plasma membrane 38.42 37.36
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 22.03 37.32
CDY45904 Canola plasma membrane 38.14 37.19
CDY66443 Canola plasma membrane 38.14 37.19
CDX68485 Canola plasma membrane 33.62 37.07
Bra000923.1-P Field mustard plasma membrane 37.57 37.05
Bra029909.1-P Field mustard plasma membrane 26.27 36.76
CDX74385 Canola plasma membrane 37.57 36.74
CDX91849 Canola plasma membrane 37.29 36.46
CDX97249 Canola plasma membrane 37.29 36.46
CDX74381 Canola plasma membrane 37.29 36.26
CDY01936 Canola plasma membrane 37.01 36.19
Bra008548.1-P Field mustard extracellular, plasma membrane 35.59 36.1
AT4G01450.2 Thale cress plasma membrane 36.44 35.73
KRH04198 Soybean extracellular, plasma membrane, vacuole 25.14 35.46
CDX91850 Canola plasma membrane 29.66 35.35
Bra033290.1-P Field mustard plasma membrane 35.31 35.21
EES11693 Sorghum endoplasmic reticulum, plasma membrane, vacuole 37.01 35.03
Bra000925.1-P Field mustard plasma membrane 33.9 34.99
CDX91847 Canola plasma membrane 35.03 34.73
KXG27497 Sorghum plasma membrane 38.42 34.52
CDY15204 Canola plasma membrane 35.31 34.44
CDX90005 Canola plasma membrane 35.31 34.44
CDY32447 Canola plasma membrane 29.1 34.33
CDX97247 Canola plasma membrane 34.75 34.07
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 32.2 33.83
AT4G01430.1 Thale cress plasma membrane 34.75 33.7
CDY55329 Canola plasma membrane 34.18 33.52
Bra032617.1-P Field mustard plasma membrane 34.18 33.52
CDY70635 Canola plasma membrane 23.73 33.33
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 33.05 33.24
CDY37472 Canola cytosol, golgi, plasma membrane 33.62 32.34
Bra032618.1-P Field mustard plasma membrane 33.62 32.34
CDY32446 Canola plasma membrane 33.62 32.34
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 33.33 32.33
Bra036199.1-P Field mustard plasma membrane 36.16 31.92
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 24.58 31.75
CDX97244 Canola endoplasmic reticulum, plasma membrane 24.58 31.75
CDY70787 Canola golgi, plasma membrane 22.6 31.37
Bra008546.1-P Field mustard cytosol, extracellular, plastid 19.77 30.17
EES15555 Sorghum plasma membrane 31.07 29.33
EES00623 Sorghum plasma membrane 33.05 29.25
KXG26293 Sorghum plasma membrane 30.23 28.01
KXG19110 Sorghum plasma membrane 30.79 27.95
Bra020740.1-P Field mustard extracellular 15.82 27.72
CDX97245 Canola plastid 8.47 26.79
OQU84146 Sorghum golgi, mitochondrion, peroxisome, plasma membrane 30.23 26.68
KXG38720 Sorghum plasma membrane 26.55 26.55
OQU83175 Sorghum golgi, peroxisome, plasma membrane 26.27 25.91
OQU91985 Sorghum extracellular, golgi 17.23 24.21
CDX86350 Canola plasma membrane 38.14 22.24
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 44.35 21.3
Protein Annotations
MapMan:24.2.1.5UniProt:A0A1W0VR14InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlants:OQU75691ProteinID:OQU75691ProteinID:OQU75691.1PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF24
EnsemblPlantsGene:SORBI_3010G006700SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0009DC85C5InterPro:WAT1-relatedSEG:seg
Description
hypothetical protein
Coordinates
chr10:+:547734..553715
Molecular Weight (calculated)
39102.2 Da
IEP (calculated)
9.167
GRAVY (calculated)
0.480
Length
354 amino acids
Sequence
(BLAST)
001: MARINEWKPV IAMLVFDLIS AVTTALIKKA LQEGLDRLVL ITLRQLVATV FLAPIAYFRE RNTRPKLTLE ILVYLFFSAA FGAALSQYTF FYGLQYTTAT
101: FAITFTNVAP VLTFLIAVLL RVESLNMKNK AGAAKIVGTL TSFAGVMLLT LYKGVSLTHL ADEPSPDHHG AAPGSSSDRK SWTLGTLALL ANCLCFSFWL
201: LLQSRLTKKY PALYSSTAYM FLISSLQGGA LTAAIQRRAS VWVLTRPLEI VTVLYTGVMG SGVGYVLMTW CVEKRGPVFT SAFIPVIQIM VAMIDFFFLH
301: ENLYLGSVLG SILLILGLYI LLWGKKRDAS EASSSAADKE EEEEEEDKEK QVRS
Best Arabidopsis Sequence Match ( AT4G01440.3 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGRYVEL YLYTYIIKI
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.